Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC011155.1-201ENST00000316512 456 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 Y_RNA.6-201ENST00000362350 114 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 RNU6-533P-201ENST00000384144 107 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 RNU6-809P-201ENST00000384461 107 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AIMP1P1-201ENST00000418670 937 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AL356583.2-201ENST00000426536 280 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC110602.1-201ENST00000437414 318 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC099563.1-201ENST00000456086 418 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 OR9M1P-201ENST00000459641 921 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC074386.1-201ENST00000476560 767 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC022415.1-202ENST00000486612 523 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 RPL17P2-201ENST00000491913 451 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 IGKV1D-22-201ENST00000518953 324 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 IGLVIV-53-201ENST00000520107 367 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AP002748.2-201ENST00000528671 348 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 OR11J2P-201ENST00000555298 907 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AL021997.1-201ENST00000605757 193 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AL365181.4-201ENST00000609800 547 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 AC008250.2-201ENST00000615261 205 ntBASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRAIPQ9BWF2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 COX6B1P3-201ENST00000312310 260 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 RNU6-28P-201ENST00000362378 107 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 RNA5SP350-201ENST00000363298 111 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 SNORA77.2-201ENST00000408571 112 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 RN7SKP33-201ENST00000410942 340 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC012065.2-201ENST00000421295 375 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 RAD23BP1-201ENST00000421404 1227 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 GLRXP1-201ENST00000423261 334 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AL035410.1-201ENST00000427409 427 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AL356276.2-201ENST00000435919 558 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AL590365.1-201ENST00000450788 243 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 HMGB1P15-201ENST00000453854 435 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 SNORD42A-201ENST00000459584 64 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC104164.1-201ENST00000460282 590 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AL136126.1-201ENST00000473603 402 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC011825.1-201ENST00000484967 388 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 RN7SL714P-201ENST00000487050 298 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AP001025.2-201ENST00000490908 477 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 HMGB1P21-201ENST00000502313 581 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC112204.1-201ENST00000502591 103 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC091965.3-201ENST00000506236 208 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC108064.1-201ENST00000513791 460 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 IGKV3D-25-201ENST00000519599 235 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC092332.1-201ENST00000563684 829 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC109347.2-201ENST00000610220 349 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC012254.5-201ENST00000623573 478 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 AC079097.1-201ENST00000512187 1399 ntBASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
TRAIPQ9BWF2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms