Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.39□□□□□ -1.87
CSMD1Q96PZ7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSMD1Q96PZ7 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 CEACAMP1-201ENST00000434624 1035 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AL831737.1-201ENST00000441288 271 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC012158.1-204ENST00000483430 465 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC104619.4-201ENST00000510773 249 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AL161431.1-201ENST00000618966 4205 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 RPL23AP57-201ENST00000332361 466 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 FCF1P5-201ENST00000406490 482 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 SNORA74C-2-201ENST00000411179 201 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 TCEA1P2-201ENST00000420496 906 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC006011.1-201ENST00000442758 349 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 RNA5SP230-201ENST00000517039 122 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AL137141.1-201ENST00000624622 4836 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 ZFRP1-201ENST00000457579 2970 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 EIF1P3-201ENST00000423841 334 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 Z74696.2-201ENST00000436514 498 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC128716.1-201ENST00000475129 166 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AC068790.5-201ENST00000602741 355 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AL713922.2-201ENST00000619384 716 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 MFSD8-242ENST00000641690 4199 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 AP004289.2-201ENST00000444413 1457 ntBASIC3.38□□□□□ -1.87
CSMD1Q96PZ7 CDY3P-201ENST00000454543 1618 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC127537.2-201ENST00000439258 465 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 RPS4XP18-201ENST00000495480 763 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC010374.1-201ENST00000503762 1237 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 RFPL4AP5-201ENST00000514977 504 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC130352.1-201ENST00000602979 661 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 MIR921-201ENST00000401133 56 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 SNORA3.3-201ENST00000408712 125 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 OOSP1P1-201ENST00000423265 274 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 RPL21P23-201ENST00000446654 460 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 TUG1_1.1-201ENST00000610654 145 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AL031595.3-201ENST00000624919 14262 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 OR56B2P-201ENST00000317102 954 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 RNA5SP80-201ENST00000410475 111 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms