Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 MAPK10-304ENST00000641341 3984 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC006484.1-201ENST00000435086 1884 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AL442639.1-201ENST00000625030 1899 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC097063.1-201ENST00000426714 1797 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 RNU6-252P-201ENST00000363232 107 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 RNU5B-4P-201ENST00000363508 111 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 RNU6-1251P-201ENST00000364502 107 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 RNU6-207P-201ENST00000384137 107 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 RPS4XP9-201ENST00000405151 780 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 SNORA79B-201ENST00000410557 148 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 RPL12P28-201ENST00000430852 489 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 PPIAP13-201ENST00000434706 478 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 RPS7P2-201ENST00000435134 607 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 SETP8-201ENST00000435341 628 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AL138878.2-201ENST00000440581 1241 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 RBMY2TP-201ENST00000451162 947 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC079168.2-201ENST00000453977 416 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC020898.1-201ENST00000474167 787 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 HMGN2P47-201ENST00000559378 272 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC234771.5-201ENST00000600161 514 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AL365400.2-201ENST00000605604 902 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC073137.1-201ENST00000605636 634 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC084782.3-201ENST00000612282 578 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 MIR6810-201ENST00000622701 70 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 AC093875.1-201ENST00000623688 504 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTP4Q96DX8 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
RTP4Q96DX8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTP4Q96DX8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 EOGT-210ENST00000615922 1931 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 SAMMSON-226ENST00000642089 1582 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 TAF9BP2-201ENST00000400856 499 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC016397.1-201ENST00000412463 242 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 RPL21P43-201ENST00000425440 472 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL035246.1-201ENST00000433554 1255 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC011753.3-201ENST00000443436 406 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL031313.1-201ENST00000448435 256 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC108463.1-201ENST00000450258 347 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC010733.1-201ENST00000451515 401 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC090142.1-201ENST00000465776 462 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 NDUFA5P9-201ENST00000472609 340 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC098583.1-201ENST00000480875 255 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC082651.2-201ENST00000496833 166 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms