Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CAB39P1-201ENST00000502277 460 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNED1Q8TER0 KCTD9P6-201ENST00000522306 950 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 MIR5685-201ENST00000579080 79 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC112230.1-201ENST00000604342 547 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 CR382285.2-201ENST00000624662 1495 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNED1Q8TER0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 SNORD96B-201ENST00000386148 79 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 DPPA2P2-201ENST00000418220 897 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 VN1R96P-201ENST00000446052 858 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 ATP5G1P3-201ENST00000463301 410 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 HMGB2P1-201ENST00000591146 634 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 MIR6500-201ENST00000622700 86 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AC011503.2-201ENST00000594230 1500 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.16□□□□□ -1.58
SNED1Q8TER0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNED1Q8TER0 AC092111.2-201ENST00000611627 1414 ntBASIC5.16□□□□□ -1.58
SNED1Q8TER0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNED1Q8TER0 RAB9AP3-201ENST00000412737 573 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 YME1L1P1-201ENST00000429435 297 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 CYCSP43-201ENST00000438233 310 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 RAB9AP1-201ENST00000449393 573 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 AL591473.1-201ENST00000464297 313 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNED1Q8TER0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNED1Q8TER0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 Z98200.1-201ENST00000607298 470 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 AC090912.3-201ENST00000609775 533 ntBASIC5.15□□□□□ -1.58
SNED1Q8TER0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNED1Q8TER0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNED1Q8TER0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SNED1Q8TER0 AL929601.4-201ENST00000613011 1341 ntBASIC5.15□□□□□ -1.59
SNED1Q8TER0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNED1Q8TER0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNED1Q8TER0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.15□□□□□ -1.59
SNED1Q8TER0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.15□□□□□ -1.59
SNED1Q8TER0 RNU6-213P-201ENST00000384051 104 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 U8.11-201ENST00000384699 133 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 U8.12-201ENST00000384701 133 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 RN7SKP199-201ENST00000410325 305 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC073310.1-201ENST00000423226 1033 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 TBCAP1-201ENST00000436520 327 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 MTCO3P17-201ENST00000443775 513 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 U8.18-201ENST00000459285 133 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNED1Q8TER0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC138938.1-201ENST00000515431 782 ntBASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.14□□□□□ -1.59
SNED1Q8TER0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms