Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AP003122.4-201ENST00000530980 758 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC022432.1-201ENST00000595739 310 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AL133338.2-201ENST00000604292 736 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AL035413.2-201ENST00000604801 525 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC011816.2-201ENST00000607089 556 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC097468.3-201ENST00000607956 456 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC243773.3-201ENST00000613270 256 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AC019278.1-201ENST00000623516 479 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 ATE1-AS1-202ENST00000636460 506 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 AL359976.1-201ENST00000418655 3528 ntBASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE3DQ7Z6J8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.96□□□□□ -1.45
UBE3DQ7Z6J8 RNF6P1-201ENST00000444889 1784 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AP001541.1-201ENST00000623322 1904 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 OR11H4-201ENST00000315409 1082 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 SNRPEP3-201ENST00000338402 276 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 U8.3-201ENST00000363321 132 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 RPL7P58-201ENST00000402913 758 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 RNA5SP198-201ENST00000410376 127 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-272P-201ENST00000411028 104 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 SPA17P1-201ENST00000416656 452 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 CXCR2P1-202ENST00000443392 1074 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 OR52E7P-201ENST00000452394 933 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 RPL23AP71-201ENST00000470966 469 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 SCARNA6.1-201ENST00000516989 238 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC008562.1-201ENST00000521763 330 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AP001858.2-201ENST00000536213 601 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL121594.2-201ENST00000541658 472 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 MIR544B-201ENST00000582372 78 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC090236.2-201ENST00000587933 1101 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 NPIPB1P-202ENST00000588786 828 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 TPMTP1-201ENST00000592307 737 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC022916.3-201ENST00000592961 742 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL162730.1-201ENST00000605734 292 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL591167.1-201ENST00000607321 456 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC135507.2-201ENST00000612443 309 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AL356274.1-201ENST00000617064 410 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC139792.3-201ENST00000623525 224 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 AC099654.15-201ENST00000639802 509 ntBASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
UBE3DQ7Z6J8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms