Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 MIR6780A-201ENST00000615089 68 ntBASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 MFSD8-216ENST00000641147 4009 ntBASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX30Q5VWJ9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL590609.2-201ENST00000421430 368 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC073069.1-201ENST00000428657 441 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL096803.2-201ENST00000450032 677 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC011005.3-201ENST00000491624 395 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC112198.4-201ENST00000515450 351 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 Y_RNA.719-201ENST00000517156 106 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC105031.1-201ENST00000518550 476 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC010476.1-201ENST00000519111 851 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC133794.1-201ENST00000602731 914 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC096586.1-201ENST00000610267 561 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC019206.1-201ENST00000621938 425 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC015908.5-201ENST00000623289 343 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 U6.107-201ENST00000637108 79 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AC092162.3-201ENST00000624511 1624 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 AL450326.2-201ENST00000421913 1962 ntBASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX30Q5VWJ9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 ENSAP3-201ENST00000312710 333 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AL357515.1-201ENST00000402967 542 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 RN7SKP199-201ENST00000410325 305 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC092745.2-202ENST00000411880 369 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 TBCAP2-201ENST00000416175 326 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 QRSL1P2-201ENST00000418582 964 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC004074.1-201ENST00000421810 1063 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC083899.2-201ENST00000423285 1376 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 NRBF2P3-201ENST00000432731 865 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AL359265.2-201ENST00000434367 631 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC092170.1-201ENST00000440211 356 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 TPTE2P6-202ENST00000445572 1007 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 RPS5P7-201ENST00000456664 608 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC112206.1-201ENST00000468416 477 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 SCARNA22-201ENST00000503991 125 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 NAMPTP2-201ENST00000505629 1115 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC008758.3-201ENST00000507003 1829 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 SMARCE1P4-201ENST00000523647 241 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC083923.1-201ENST00000523708 376 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 MIR4270-201ENST00000581799 70 ntBASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX30Q5VWJ9 AC068790.7-201ENST00000602347 528 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms