Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL049545.1-201ENST00000401856 572 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 CTSL3P-202ENST00000412179 788 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC016907.1-201ENST00000419483 435 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 KATNBL1P3-201ENST00000443475 909 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 NPM1P13-201ENST00000452663 865 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 TRBV8-2-201ENST00000475637 270 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC069528.1-202ENST00000482888 637 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 HPRT1P2-201ENST00000505250 544 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 MTCO2P15-201ENST00000532655 656 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 YWHABP2-201ENST00000540201 713 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC137627.1-201ENST00000545761 289 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC125611.1-201ENST00000549563 229 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AL353778.1-201ENST00000603149 408 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC138393.1-206ENST00000540997 1886 ntBASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SLC44A4Q53GD3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RNF6P1-201ENST00000444889 1784 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 SNURFL-201ENST00000309296 343 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RN7SKP185-201ENST00000362813 326 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 Y_RNA.318-201ENST00000365131 97 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 MIR105-1-201ENST00000385222 81 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RPL11P3-201ENST00000395256 523 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 GPS2P1-201ENST00000411761 986 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RPSAP35-201ENST00000413753 818 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 GJA6P-201ENST00000415117 1042 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 OR4K6P-201ENST00000416478 897 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 GSTA7P-201ENST00000438425 448 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RPL7P16-201ENST00000479738 738 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RPL23AP44-201ENST00000482216 473 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 PDCL3P4-201ENST00000489621 720 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 MTND1P22-201ENST00000510572 951 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 GTF2F2P1-201ENST00000511083 675 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ZNF321P-202ENST00000550843 495 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 POLR2KP1-201ENST00000553226 168 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AL442163.2-201ENST00000553912 710 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 EDDM3DP-201ENST00000554692 434 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 MIR378J-201ENST00000611988 109 ntBASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A4Q53GD3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms