Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPL7P9-201ENST00000468715 747 ntBASIC2.78□□□□□ -1.96
RPL39P62891 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.78□□□□□ -1.96
RPL39P62891 AC083982.1-201ENST00000485679 344 ntBASIC2.78□□□□□ -1.96
RPL39P62891 RN7SL810P-201ENST00000493031 276 ntBASIC2.78□□□□□ -1.96
RPL39P62891 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.78□□□□□ -1.96
RPL39P62891 AC008958.1-201ENST00000511047 682 ntBASIC2.78□□□□□ -1.96
RPL39P62891 AF186190.1-201ENST00000517470 480 ntBASIC2.78□□□□□ -1.96
RPL39P62891 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.78□□□□□ -1.96
RPL39P62891 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.78□□□□□ -1.96
RPL39P62891 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2.78□□□□□ -1.96
RPL39P62891 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.78□□□□□ -1.96
RPL39P62891 AC068790.7-201ENST00000602347 528 ntBASIC2.78□□□□□ -1.96
RPL39P62891 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.78□□□□□ -1.96
RPL39P62891 AL512624.1-201ENST00000613638 469 ntBASIC2.78□□□□□ -1.96
RPL39P62891 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC2.78□□□□□ -1.96
RPL39P62891 AL139254.3-201ENST00000641097 674 ntBASIC2.78□□□□□ -1.96
RPL39P62891 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC2.78□□□□□ -1.96
RPL39P62891 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 SNORA51.1-201ENST00000363243 140 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.77□□□□□ -1.97
RPL39P62891 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 SPTLC1P2-201ENST00000407089 121 ntBASIC2.77□□□□□ -1.97
RPL39P62891 RPL7AP73-201ENST00000413490 353 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 AL360081.1-201ENST00000428299 555 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC2.77□□□□□ -1.97
RPL39P62891 RPS17P13-201ENST00000448974 407 ntBASIC2.77□□□□□ -1.97
RPL39P62891 MTND2P28-201ENST00000457540 1044 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 RNA5SP246-201ENST00000458909 119 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC092691.2-201ENST00000461787 803 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC110749.1-201ENST00000462007 357 ntBASIC2.77□□□□□ -1.97
RPL39P62891 RN7SL481P-201ENST00000477764 299 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC021146.1-201ENST00000511202 716 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC2.77□□□□□ -1.97
RPL39P62891 ATG10-208ENST00000513634 618 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 RN7SKP83-201ENST00000516512 178 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 AC010476.1-201ENST00000519111 851 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.77□□□□□ -1.97
RPL39P62891 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RPL39P62891 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 AC092747.2-201ENST00000545069 983 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.77□□□□□ -1.97
RPL39P62891 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 MIR4436B2-201ENST00000581415 91 ntBASIC2.77□□□□□ -1.97
RPL39P62891 MIR4436B1-201ENST00000583272 91 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 RPL12P25-202ENST00000598100 674 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC020910.2-201ENST00000603635 610 ntBASIC2.77□□□□□ -1.97
RPL39P62891 AC078899.5-201ENST00000612475 178 ntBASIC2.77□□□□□ -1.97
RPL39P62891 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC2.77□□□□□ -1.97
RPL39P62891 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.77□□□□□ -1.97
RPL39P62891 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC2.77□□□□□ -1.97
RPL39P62891 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 AL449283.1-201ENST00000602631 3403 ntBASIC2.77□□□□□ -1.97
RPL39P62891 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
RPL39P62891 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPL39P62891 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RPL39P62891 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RPL39P62891 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RPL39P62891 MTND4P10-201ENST00000446199 1363 ntBASIC2.76□□□□□ -1.97
RPL39P62891 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPL39P62891 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
RPL39P62891 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.76□□□□□ -1.97
RPL39P62891 RPS4XP5-202ENST00000449995 1334 ntBASIC2.76□□□□□ -1.97
RPL39P62891 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPL39P62891 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.76□□□□□ -1.97
RPL39P62891 SNORA60-201ENST00000362396 134 ntBASIC2.76□□□□□ -1.97
RPL39P62891 HLFP1-201ENST00000402375 499 ntBASIC2.76□□□□□ -1.97
RPL39P62891 HMGB3P19-201ENST00000403971 560 ntBASIC2.76□□□□□ -1.97
RPL39P62891 Z98941.1-201ENST00000407764 100 ntBASIC2.76□□□□□ -1.97
RPL39P62891 RN7SKP229-201ENST00000410465 302 ntBASIC2.76□□□□□ -1.97
RPL39P62891 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 AC069213.2-201ENST00000420238 366 ntBASIC2.76□□□□□ -1.97
RPL39P62891 GAPDHP49-201ENST00000421421 961 ntBASIC2.76□□□□□ -1.97
RPL39P62891 OR5BE1P-201ENST00000425977 939 ntBASIC2.76□□□□□ -1.97
RPL39P62891 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 HIGD1AP4-201ENST00000430194 280 ntBASIC2.76□□□□□ -1.97
RPL39P62891 COX6B1P7-201ENST00000430845 235 ntBASIC2.76□□□□□ -1.97
RPL39P62891 SUMO2P8-201ENST00000434672 286 ntBASIC2.76□□□□□ -1.97
RPL39P62891 RANP8-201ENST00000444720 713 ntBASIC2.76□□□□□ -1.97
RPL39P62891 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms