Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
ACTBP60709 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.84□□□□□ -1.8
ACTBP60709 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
ACTBP60709 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.84□□□□□ -1.8
ACTBP60709 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ACTBP60709 RN7SKP149-201ENST00000363008 344 ntBASIC3.83□□□□□ -1.8
ACTBP60709 RPL31P52-201ENST00000407532 367 ntBASIC3.83□□□□□ -1.8
ACTBP60709 SMC4P1-201ENST00000414479 527 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC048351.1-201ENST00000420064 602 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.83□□□□□ -1.8
ACTBP60709 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 AC007559.1-201ENST00000428736 355 ntBASIC3.83□□□□□ -1.8
ACTBP60709 ELOCP8-201ENST00000439309 332 ntBASIC3.83□□□□□ -1.8
ACTBP60709 ELOCP15-201ENST00000442090 332 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.83□□□□□ -1.8
ACTBP60709 EEF1A1P1-201ENST00000447052 739 ntBASIC3.83□□□□□ -1.8
ACTBP60709 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.83□□□□□ -1.8
ACTBP60709 AC105918.1-201ENST00000474399 838 ntBASIC3.83□□□□□ -1.8
ACTBP60709 SYT14P1-201ENST00000481459 721 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC139783.2-201ENST00000504847 1145 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC017037.1-201ENST00000508460 471 ntBASIC3.83□□□□□ -1.8
ACTBP60709 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 RNU6-347P-201ENST00000516658 105 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.83□□□□□ -1.8
ACTBP60709 AC009117.1-201ENST00000563948 554 ntBASIC3.83□□□□□ -1.8
ACTBP60709 BGLT3-201ENST00000564523 994 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.83□□□□□ -1.8
ACTBP60709 RPL23AP97-201ENST00000568955 471 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 AC090181.2-201ENST00000602975 672 ntBASIC3.83□□□□□ -1.8
ACTBP60709 AC005084.1-201ENST00000605160 304 ntBASIC3.83□□□□□ -1.8
ACTBP60709 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.83□□□□□ -1.8
ACTBP60709 AC133644.2-201ENST00000608142 540 ntBASIC3.83□□□□□ -1.8
ACTBP60709 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 MIR6730-201ENST00000622213 67 ntBASIC3.83□□□□□ -1.8
ACTBP60709 C2orf27A-204ENST00000623058 969 ntBASIC3.83□□□□□ -1.8
ACTBP60709 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 MFSD8-220ENST00000641243 1422 ntBASIC3.83□□□□□ -1.8
ACTBP60709 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACTBP60709 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.83□□□□□ -1.8
ACTBP60709 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
ACTBP60709 MAPK10-372ENST00000641954 3413 ntBASIC3.83□□□□□ -1.8
ACTBP60709 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.83□□□□□ -1.8
ACTBP60709 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 RPL7P53-201ENST00000421245 739 ntBASIC3.82□□□□□ -1.8
ACTBP60709 RAD23BP1-201ENST00000421404 1227 ntBASIC3.82□□□□□ -1.8
ACTBP60709 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AC009965.2-201ENST00000425328 970 ntBASIC3.82□□□□□ -1.8
ACTBP60709 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
ACTBP60709 VN1R54P-201ENST00000435210 1049 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 RPL7P61-201ENST00000451721 751 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.82□□□□□ -1.8
ACTBP60709 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 AC079804.1-201ENST00000461922 436 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC063943.1-201ENST00000465434 453 ntBASIC3.82□□□□□ -1.8
ACTBP60709 RPL36AP41-201ENST00000493820 306 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC106872.2-201ENST00000494303 480 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AP001922.4-201ENST00000526967 290 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms