Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 RPL12P11-201ENST00000439970 501 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC023271.1-201ENST00000445936 1090 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 MTND2P19-201ENST00000449129 1012 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC108463.1-201ENST00000450258 347 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC097262.1-201ENST00000452559 548 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 RN7SL197P-201ENST00000466981 299 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 OR52A4P-201ENST00000472867 958 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 RPL30P11-201ENST00000495304 339 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 RNA5SP228-201ENST00000516232 133 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.04□□□□□ -1.6
SUMO3P55854 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.04□□□□□ -1.6
SUMO3P55854 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC015720.2-201ENST00000567709 334 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 AL163642.2-201ENST00000604722 1019 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC105129.3-201ENST00000605455 485 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC005962.2-201ENST00000611427 652 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AC004223.4-201ENST00000612426 332 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 AL607023.1-201ENST00000620045 248 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 SNORA17.5-201ENST00000630429 132 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 AL390862.1-201ENST00000635467 1469 ntBASIC5.04□□□□□ -1.6
SUMO3P55854 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SUMO3P55854 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.04□□□□□ -1.6
SUMO3P55854 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SUMO3P55854 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SUMO3P55854 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 AC087359.1-201ENST00000508335 1740 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 PANDAR-201ENST00000629595 1506 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 AC107081.3-201ENST00000612715 2034 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SUMO3P55854 TMSB4XP4-201ENST00000323496 618 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RNA5SP453-201ENST00000362503 119 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RNU6-216P-201ENST00000363282 104 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.03□□□□□ -1.6
SUMO3P55854 SNORD116-9-201ENST00000384000 95 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 SNORD116-3-201ENST00000384287 95 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 SNORD116-7-201ENST00000384404 95 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 SNORD116-5-201ENST00000384462 95 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SUMO3P55854 U3.28-201ENST00000391249 210 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.03□□□□□ -1.6
SUMO3P55854 P2RY10P2-201ENST00000416730 913 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SUMO3P55854 AC104843.2-201ENST00000427666 297 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 AL353597.2-202ENST00000434901 373 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RPS25P9-201ENST00000435591 252 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RPL36AP39-201ENST00000445859 318 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.03□□□□□ -1.6
SUMO3P55854 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.03□□□□□ -1.6
SUMO3P55854 MTND3P7-201ENST00000474435 343 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RPL30P6-201ENST00000475925 342 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RN7SL273P-201ENST00000481561 299 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.03□□□□□ -1.6
SUMO3P55854 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.03□□□□□ -1.6
SUMO3P55854 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.03□□□□□ -1.6
SUMO3P55854 RFPL4AP5-201ENST00000514977 504 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 RNU6-759P-201ENST00000516740 103 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 SMARCE1P4-201ENST00000523647 241 ntBASIC5.03□□□□□ -1.6
SUMO3P55854 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.03□□□□□ -1.6
SUMO3P55854 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms