Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RN7SKP104-201ENST00000362605 328 ntBASIC4.43□□□□□ -1.7
CDH11P55287 SNORA66-201ENST00000384792 133 ntBASIC4.43□□□□□ -1.7
CDH11P55287 U3.35-201ENST00000408405 208 ntBASIC4.43□□□□□ -1.7
CDH11P55287 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH11P55287 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 FABP5P3-201ENST00000437960 408 ntBASIC4.43□□□□□ -1.7
CDH11P55287 YWHAZP2-201ENST00000440317 728 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 RPS26P2-201ENST00000440331 348 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH11P55287 AL035551.1-201ENST00000446931 348 ntBASIC4.43□□□□□ -1.7
CDH11P55287 TRY2P-201ENST00000448860 689 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH11P55287 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH11P55287 GTF2IP12-201ENST00000456547 356 ntBASIC4.43□□□□□ -1.7
CDH11P55287 RPS3AP41-201ENST00000462701 778 ntBASIC4.43□□□□□ -1.7
CDH11P55287 RPL7AP10-201ENST00000481016 791 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 Y_RNA.719-201ENST00000517156 106 ntBASIC4.43□□□□□ -1.7
CDH11P55287 BRD9P1-201ENST00000529855 560 ntBASIC4.43□□□□□ -1.7
CDH11P55287 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH11P55287 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 AC124856.1-201ENST00000600819 896 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AL022067.1-201ENST00000602426 454 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AC005084.1-201ENST00000605160 304 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
CDH11P55287 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 AC092435.4-201ENST00000623012 4159 ntBASIC4.43□□□□□ -1.7
CDH11P55287 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 ECM1P2-201ENST00000503354 1577 ntBASIC4.43□□□□□ -1.7
CDH11P55287 ZNF849P-201ENST00000594711 1566 ntBASIC4.43□□□□□ -1.7
CDH11P55287 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 AC093311.1-201ENST00000506586 2021 ntBASIC4.43□□□□□ -1.7
CDH11P55287 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH11P55287 MAPK10-349ENST00000641767 3661 ntBASIC4.42□□□□□ -1.7
CDH11P55287 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.42□□□□□ -1.7
CDH11P55287 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 SNORA51.8-201ENST00000384234 132 ntBASIC4.42□□□□□ -1.7
CDH11P55287 RNU6-452P-201ENST00000384406 107 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH11P55287 Z97832.1-201ENST00000402490 328 ntBASIC4.42□□□□□ -1.7
CDH11P55287 RNA5SP498-201ENST00000411342 120 ntBASIC4.42□□□□□ -1.7
CDH11P55287 COX6B1P1-201ENST00000415962 213 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 VN2R3P-201ENST00000422626 1412 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 AC104837.2-201ENST00000427236 424 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH11P55287 PRPF38AP2-201ENST00000438179 851 ntBASIC4.42□□□□□ -1.7
CDH11P55287 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH11P55287 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH11P55287 TCEA1P1-201ENST00000449716 880 ntBASIC4.42□□□□□ -1.7
CDH11P55287 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 Z95152.1-201ENST00000453556 656 ntBASIC4.42□□□□□ -1.7
CDH11P55287 MTCO1P18-201ENST00000455518 1419 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH11P55287 AC026414.1-201ENST00000504046 698 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 HAUS1P1-201ENST00000505275 832 ntBASIC4.42□□□□□ -1.7
CDH11P55287 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 AC002456.2-201ENST00000509356 380 ntBASIC4.42□□□□□ -1.7
CDH11P55287 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH11P55287 RNA5SP464-201ENST00000516251 108 ntBASIC4.42□□□□□ -1.7
CDH11P55287 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH11P55287 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH11P55287 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 AC021451.1-201ENST00000523498 1129 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH11P55287 OR5AZ1P-201ENST00000527448 943 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH11P55287 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 AC087477.6-201ENST00000559595 843 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH11P55287 MIR4691-201ENST00000583764 85 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 AC133552.5-201ENST00000604266 540 ntBASIC4.42□□□□□ -1.7
CDH11P55287 IMMP1LP1-201ENST00000605170 488 ntBASIC4.42□□□□□ -1.7
CDH11P55287 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC093673.2-201ENST00000609674 331 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms