Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CCDC75P1-201ENST00000469247 791 ntBASIC4.5□□□□□ -1.69
CDH4P55283 RN7SL303P-201ENST00000469773 251 ntBASIC4.5□□□□□ -1.69
CDH4P55283 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 HPRT1P1-201ENST00000509498 657 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH4P55283 AC090151.1-201ENST00000520784 730 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 EIF1AXP2-201ENST00000555940 413 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AC021483.2-201ENST00000567415 758 ntBASIC4.5□□□□□ -1.69
CDH4P55283 RPL23AP97-201ENST00000568955 471 ntBASIC4.5□□□□□ -1.69
CDH4P55283 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AL160290.3-201ENST00000604869 165 ntBASIC4.5□□□□□ -1.69
CDH4P55283 HMGB1P51-201ENST00000605166 638 ntBASIC4.5□□□□□ -1.69
CDH4P55283 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH4P55283 Z98200.1-201ENST00000607298 470 ntBASIC4.5□□□□□ -1.69
CDH4P55283 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDH4P55283 AC067931.1-201ENST00000624190 671 ntBASIC4.5□□□□□ -1.69
CDH4P55283 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH4P55283 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AL356489.2-201ENST00000566968 3528 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 AC091046.3-201ENST00000631455 1574 ntBASIC4.49□□□□□ -1.69
CDH4P55283 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH4P55283 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDH4P55283 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH4P55283 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDH4P55283 RN7SKP199-201ENST00000410325 305 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC011933.1-201ENST00000413334 321 ntBASIC4.49□□□□□ -1.69
CDH4P55283 RPL6P29-201ENST00000414863 865 ntBASIC4.49□□□□□ -1.69
CDH4P55283 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH4P55283 IPMKP1-201ENST00000425988 855 ntBASIC4.49□□□□□ -1.69
CDH4P55283 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.49□□□□□ -1.69
CDH4P55283 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH4P55283 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH4P55283 RPL7AP52-201ENST00000458096 790 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC116533.1-201ENST00000459748 321 ntBASIC4.49□□□□□ -1.69
CDH4P55283 RPL5P13-201ENST00000462840 709 ntBASIC4.49□□□□□ -1.69
CDH4P55283 RPL5P30-201ENST00000465511 891 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH4P55283 AC090013.1-201ENST00000485147 480 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.49□□□□□ -1.69
CDH4P55283 AC108471.1-201ENST00000513977 287 ntBASIC4.49□□□□□ -1.69
CDH4P55283 OR5BC1P-201ENST00000529327 739 ntBASIC4.49□□□□□ -1.69
CDH4P55283 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC090515.3-201ENST00000560431 315 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC025175.1-201ENST00000606482 759 ntBASIC4.49□□□□□ -1.69
CDH4P55283 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH4P55283 AL391597.1-201ENST00000618707 694 ntBASIC4.49□□□□□ -1.69
CDH4P55283 AC011944.2-201ENST00000624440 683 ntBASIC4.49□□□□□ -1.69
CDH4P55283 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH4P55283 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDH4P55283 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH4P55283 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH4P55283 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH4P55283 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH4P55283 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH4P55283 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH4P55283 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 RNU4-23P-201ENST00000362839 140 ntBASIC4.48□□□□□ -1.69
CDH4P55283 RNU6-225P-201ENST00000384613 103 ntBASIC4.48□□□□□ -1.69
CDH4P55283 MIR195-201ENST00000385194 87 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 GAPDHP49-201ENST00000421421 961 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 CHIAP3-201ENST00000423668 1133 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 Z85994.2-201ENST00000434327 452 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 ARL5AP3-201ENST00000439327 386 ntBASIC4.48□□□□□ -1.69
CDH4P55283 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH4P55283 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 AC092593.2-201ENST00000513866 913 ntBASIC4.48□□□□□ -1.69
CDH4P55283 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AC067904.2-201ENST00000517322 1283 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 PSMB7P1-201ENST00000556349 514 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms