Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 SNORA3.4-201ENST00000515969 96 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.11□□□□□ -1.43
CNGA1P29973 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.11□□□□□ -1.43
CNGA1P29973 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CNGA1P29973 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
CNGA1P29973 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.11□□□□□ -1.43
CNGA1P29973 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.11□□□□□ -1.43
CNGA1P29973 NMNAT1P5-201ENST00000559657 841 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC005341.1-201ENST00000571086 708 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 RN7SL52P-201ENST00000584271 284 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 BNIP3P24-201ENST00000593398 557 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 AC010200.2-201ENST00000605098 235 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 AC005084.1-201ENST00000605160 304 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 AL139344.1-201ENST00000605228 195 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 AC069545.1-201ENST00000605671 358 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.11□□□□□ -1.43
CNGA1P29973 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.11□□□□□ -1.43
CNGA1P29973 RN7SL722P-201ENST00000617780 284 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 RN7SL565P-201ENST00000618246 284 ntBASIC6.11□□□□□ -1.43
CNGA1P29973 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CNGA1P29973 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.11□□□□□ -1.43
CNGA1P29973 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CNGA1P29973 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNGA1P29973 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNGA1P29973 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNGA1P29973 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CNGA1P29973 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.1□□□□□ -1.43
CNGA1P29973 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.1□□□□□ -1.43
CNGA1P29973 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.1□□□□□ -1.43
CNGA1P29973 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 HMGB1P5-201ENST00000255320 642 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 FAM133CP-201ENST00000332869 704 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 HSPA8P15-201ENST00000401676 786 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 FABP12P1-201ENST00000401911 322 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 RNA5SP487-201ENST00000410186 122 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC007435.1-201ENST00000421086 415 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 HMGN2P27-201ENST00000427352 270 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 RPS27AP6-201ENST00000427962 448 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 ACTR3P2-201ENST00000439585 1257 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 ELOCP10-201ENST00000440624 327 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 NECAP1P2-201ENST00000455668 727 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 NDUFA5P9-201ENST00000472609 340 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC093267.1-201ENST00000489176 961 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC093755.1-201ENST00000512950 1023 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.1□□□□□ -1.43
CNGA1P29973 FABP5P12-201ENST00000515543 389 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 OR5AZ1P-201ENST00000527448 943 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AP001317.1-201ENST00000531194 960 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AP004607.2-201ENST00000533949 322 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AC024940.3-201ENST00000538551 316 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AC122688.1-201ENST00000541494 223 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.1□□□□□ -1.43
CNGA1P29973 AL354943.1-201ENST00000572103 781 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AC005412.1-201ENST00000580812 1049 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 AC010503.3-201ENST00000594355 540 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 ELOCP34-201ENST00000604436 327 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AC015712.7-201ENST00000615211 635 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.1□□□□□ -1.43
CNGA1P29973 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CNGA1P29973 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CNGA1P29973 CASC19-204ENST00000641001 2055 ntBASIC6.1□□□□□ -1.43
CNGA1P29973 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CNGA1P29973 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNGA1P29973 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC006484.1-201ENST00000435086 1884 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms