Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC093909.5-201ENST00000621839 1799 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 HSPD1P11-201ENST00000508643 1702 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 SNORA79B-201ENST00000410557 148 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 VDAC1P6-201ENST00000430062 855 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AL356276.2-201ENST00000435919 558 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 RPS4XP4-201ENST00000443195 763 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 MTND6P5-201ENST00000448266 512 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 FCF1P7-201ENST00000451185 558 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 RPS23P7-201ENST00000466210 444 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 RPL29P14-201ENST00000495837 428 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 SNORA31.9-201ENST00000516429 84 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 MTND1P6-201ENST00000523621 946 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AL451044.1-201ENST00000604867 238 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 AC012603.1-201ENST00000606424 528 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 MIR6716-201ENST00000613413 80 ntBASIC4.16□□□□□ -1.74
HLA-DQB2P05538 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DQB2P05538 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQB2P05538 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 OR11H4-201ENST00000315409 1082 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC068538.1-201ENST00000376856 336 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AMZ2P2-201ENST00000406819 1057 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 OR8G2P-201ENST00000412796 908 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 EIF2S2P5-201ENST00000457635 968 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 RPL7P1-201ENST00000468161 747 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 RPL7P9-201ENST00000468715 747 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 HPRT1P2-201ENST00000505250 544 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 RN7SKP5-201ENST00000517045 272 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 HIGD1AP5-201ENST00000529959 259 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 UBTFL9-201ENST00000534504 1148 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC025884.1-201ENST00000556034 378 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC012417.1-201ENST00000582307 1039 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC124856.1-201ENST00000600819 896 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 SNX18P1Y-201ENST00000616231 511 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC010608.2-201ENST00000624830 470 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC138627.1-204ENST00000641894 765 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 ZNF962P-201ENST00000443465 3140 ntBASIC4.15□□□□□ -1.75
HLA-DQB2P05538 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQB2P05538 AC009951.1-201ENST00000623674 2614 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 SNORD35B-201ENST00000363660 87 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 HSPE1P12-201ENST00000412576 301 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 TPT1P2-201ENST00000413105 503 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms