Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC083843.3-201ENST00000623679 2186 ntBASIC4.74□□□□□ -1.65
LDLRP01130 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LDLRP01130 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.74□□□□□ -1.65
LDLRP01130 AL672167.1-205ENST00000641112 3080 ntBASIC4.74□□□□□ -1.65
LDLRP01130 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LDLRP01130 AC008432.1-201ENST00000615912 1320 ntBASIC4.73□□□□□ -1.65
LDLRP01130 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 CASC19-206ENST00000641028 1430 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC092747.4-201ENST00000620519 1861 ntBASIC4.73□□□□□ -1.65
LDLRP01130 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LDLRP01130 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 AL121950.1-201ENST00000624993 2077 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 RNA5SP505-201ENST00000364748 108 ntBASIC4.73□□□□□ -1.65
LDLRP01130 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 SNORA2.3-201ENST00000383920 135 ntBASIC4.73□□□□□ -1.65
LDLRP01130 MIR142-201ENST00000384835 87 ntBASIC4.73□□□□□ -1.65
LDLRP01130 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AL024507.1-201ENST00000412741 274 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC119751.6-201ENST00000416712 186 ntBASIC4.73□□□□□ -1.65
LDLRP01130 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.73□□□□□ -1.65
LDLRP01130 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 PNRC2P1-201ENST00000423940 420 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC013262.1-201ENST00000426710 252 ntBASIC4.73□□□□□ -1.65
LDLRP01130 FO393419.3-201ENST00000428741 282 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC022022.1-201ENST00000430304 178 ntBASIC4.73□□□□□ -1.65
LDLRP01130 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 MRPL48P1-201ENST00000445390 636 ntBASIC4.73□□□□□ -1.65
LDLRP01130 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 RPS20P4-201ENST00000461659 355 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC068587.2-201ENST00000478386 781 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC098862.1-201ENST00000504991 413 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 OR7H2P-201ENST00000513483 306 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC012400.1-201ENST00000518452 381 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 AC021006.3-201ENST00000530771 192 ntBASIC4.73□□□□□ -1.65
LDLRP01130 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.73□□□□□ -1.65
LDLRP01130 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.73□□□□□ -1.65
LDLRP01130 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.73□□□□□ -1.65
LDLRP01130 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 MIR4737-201ENST00000583979 81 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.73□□□□□ -1.65
LDLRP01130 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.73□□□□□ -1.65
LDLRP01130 AL049844.2-201ENST00000604280 628 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC245100.7-201ENST00000609678 442 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AC006946.3-201ENST00000609791 756 ntBASIC4.73□□□□□ -1.65
LDLRP01130 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.73□□□□□ -1.65
LDLRP01130 MIR6758-201ENST00000620653 63 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AP003485.1-201ENST00000625093 753 ntBASIC4.73□□□□□ -1.65
LDLRP01130 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LDLRP01130 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LDLRP01130 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
LDLRP01130 SMG1P6-201ENST00000532337 2930 ntBASIC4.73□□□□□ -1.65
LDLRP01130 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.73□□□□□ -1.65
LDLRP01130 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LDLRP01130 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.72□□□□□ -1.65
LDLRP01130 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
LDLRP01130 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 AC007382.1-201ENST00000624376 2618 ntBASIC4.72□□□□□ -1.65
LDLRP01130 RN7SKP95-201ENST00000362860 303 ntBASIC4.72□□□□□ -1.65
LDLRP01130 SNORA70.2-201ENST00000364506 135 ntBASIC4.72□□□□□ -1.65
LDLRP01130 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 RNU6-354P-201ENST00000383862 107 ntBASIC4.72□□□□□ -1.65
LDLRP01130 RNU6-610P-201ENST00000384264 107 ntBASIC4.72□□□□□ -1.65
LDLRP01130 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LDLRP01130 NCSTNP1-201ENST00000406229 144 ntBASIC4.72□□□□□ -1.65
LDLRP01130 RNU2-50P-201ENST00000410494 143 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.72□□□□□ -1.65
LDLRP01130 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.72□□□□□ -1.65
LDLRP01130 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 DPY19L1P2-201ENST00000426647 915 ntBASIC4.72□□□□□ -1.65
LDLRP01130 FO393414.1-201ENST00000428697 1184 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC068287.1-201ENST00000430283 295 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AL035458.1-201ENST00000433096 585 ntBASIC4.72□□□□□ -1.65
LDLRP01130 Z80107.1-201ENST00000436830 412 ntBASIC4.72□□□□□ -1.65
LDLRP01130 TXNP5-201ENST00000441043 315 ntBASIC4.72□□□□□ -1.65
LDLRP01130 RPL6P5-201ENST00000445678 828 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AL035551.1-201ENST00000446931 348 ntBASIC4.72□□□□□ -1.65
LDLRP01130 CYCSP42-201ENST00000450823 238 ntBASIC4.72□□□□□ -1.65
LDLRP01130 MTATP6P14-201ENST00000455189 673 ntBASIC4.72□□□□□ -1.65
LDLRP01130 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.72□□□□□ -1.65
LDLRP01130 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LDLRP01130 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.72□□□□□ -1.65
LDLRP01130 GTF2F2P1-201ENST00000511083 675 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms