Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM38O00635 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM38O00635 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 SNORA51.12-201ENST00000384448 134 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 RNU2-50P-201ENST00000410494 143 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 RPSAP35-201ENST00000413753 818 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 RPL6P29-201ENST00000414863 865 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC107081.1-201ENST00000414975 361 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 MTND2P18-201ENST00000419962 1030 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 XKRYP1-201ENST00000423438 492 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC093655.2-201ENST00000425735 631 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 DYNLL1P7-201ENST00000429273 258 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC010153.1-201ENST00000432862 727 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 XKRYP2-201ENST00000432915 492 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 RPL19P16-201ENST00000433839 588 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 USP9YP24-201ENST00000434374 697 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 AL772161.1-201ENST00000439130 476 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 USP9YP17-201ENST00000444617 696 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 MTND1P1-201ENST00000445453 368 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM38O00635 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 RPL7P6-201ENST00000480903 738 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 RN7SL809P-201ENST00000482040 297 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC069304.1-201ENST00000491593 704 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC113420.1-201ENST00000507903 571 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 HMGB1P44-201ENST00000508597 572 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 MTND6P2-201ENST00000512226 524 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 Y_RNA.655-201ENST00000515919 96 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 RN7SKP66-201ENST00000516681 231 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 IGJP1-201ENST00000522682 475 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC105233.3-201ENST00000531125 744 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 MTCYBP33-201ENST00000575007 1130 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC010200.2-201ENST00000605098 235 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC004232.3-201ENST00000622977 525 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AP001784.1-201ENST00000624107 428 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 OR1S1-201ENST00000624470 978 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC116563.2-201ENST00000624751 535 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC074101.1-201ENST00000637861 241 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM38O00635 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM38O00635 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 AC111188.2-201ENST00000529697 1387 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
TRIM38O00635 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 ZNF29P-201ENST00000225587 168 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 RN7SKP115-201ENST00000363177 317 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM38O00635 MIR92A2-201ENST00000385299 75 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 BTF3P8-201ENST00000414577 526 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM38O00635 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 MTCO3P30-201ENST00000426425 670 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 RPL21P110-201ENST00000433345 446 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 ACTR3P2-201ENST00000439585 1257 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 MTCYBP42-201ENST00000444653 1130 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 OR6K5P-201ENST00000447050 945 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms