Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM1O00151 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PDLIM1O00151 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 AC009313.2-201ENST00000417893 1941 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 RNA5SP123-201ENST00000363244 119 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 RNU6-225P-201ENST00000384613 103 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PDLIM1O00151 CCNB2P1-201ENST00000399411 1150 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 Z97832.1-201ENST00000402490 328 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AL021331.1-201ENST00000402817 582 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AP002530.1-201ENST00000405705 684 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 Z98941.1-201ENST00000407764 100 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 RPL26P37-201ENST00000411983 438 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM1O00151 RPS26P13-201ENST00000419030 330 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 RPS26P47-201ENST00000427219 348 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AC090013.1-201ENST00000485147 480 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AC231760.1-201ENST00000498002 260 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 HMGB1P3-201ENST00000502802 616 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.41□□□□□ -1.7
PDLIM1O00151 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM1O00151 UBTFL9-201ENST00000534504 1148 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AC008033.2-201ENST00000542626 177 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM1O00151 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AGGF1P8-201ENST00000562979 1000 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AL031666.3-201ENST00000609320 1006 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 EIF3FP1-201ENST00000613970 806 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AC090510.2-201ENST00000617465 629 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AP006248.2-201ENST00000623309 592 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 AC091905.4-201ENST00000623432 202 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 AL163152.1-201ENST00000642001 374 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 HSPA8P1-201ENST00000425843 1833 ntBASIC4.41□□□□□ -1.7
PDLIM1O00151 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.7
PDLIM1O00151 AL355852.1-201ENST00000454081 1771 ntBASIC4.4□□□□□ -1.7
PDLIM1O00151 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.7
PDLIM1O00151 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM1O00151 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM1O00151 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC011155.1-201ENST00000316512 456 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AC007685.1-201ENST00000329806 452 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM1O00151 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 RPS17P8-201ENST00000434525 335 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 RPS20P1-201ENST00000434853 354 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 RPL7P11-201ENST00000437586 658 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AL691517.1-201ENST00000440833 1235 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AL645939.1-201ENST00000453429 797 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC007688.1-201ENST00000475592 759 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AC008897.1-201ENST00000494006 347 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC140172.1-201ENST00000502928 141 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 MRPS33P2-201ENST00000507850 322 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AC093770.1-201ENST00000511559 571 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 RNU2-30P-201ENST00000516209 141 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 HMGB1P46-201ENST00000520062 610 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC010424.2-201ENST00000607594 443 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 AC091948.2-201ENST00000636510 279 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM1O00151 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC017002.4-201ENST00000604721 1525 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms