Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC084824.1-201ENST00000550917 1005 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC044913.1-201ENST00000557200 430 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 MIR3912-201ENST00000577566 105 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC006116.3-201ENST00000592968 361 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 BNIP3P4-201ENST00000604946 565 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC105129.3-201ENST00000605455 485 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC080013.3-201ENST00000606839 578 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AP000238.1-201ENST00000608759 426 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AC090527.3-201ENST00000619041 548 ntBASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPDC1A2A3K4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC114947.2-201ENST00000565748 2125 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC100871.1-201ENST00000507871 1456 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 CASC19-206ENST00000641028 1430 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 U3.36-201ENST00000408418 213 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 CDY14P-201ENST00000431260 1014 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RPL12P3-201ENST00000440080 396 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 ATP5C1P1-201ENST00000441945 895 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC073648.4-201ENST00000442655 781 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 MTCO2P7-201ENST00000446518 666 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 CDY23P-201ENST00000451661 1014 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC073387.1-201ENST00000453261 709 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RPL31P3-201ENST00000458430 332 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RPL7P48-201ENST00000461513 746 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC009127.1-201ENST00000467090 155 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RN7SL189P-201ENST00000468631 289 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC111000.2-201ENST00000507775 550 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC006427.1-201ENST00000514359 712 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 RNA5SP230-201ENST00000517039 122 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AP006245.2-201ENST00000522004 300 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 DUXAP1-201ENST00000556632 463 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC135628.1-201ENST00000568867 534 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC019322.1-201ENST00000571869 389 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 MIR4660-201ENST00000583549 74 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC095055.1-201ENST00000603472 1113 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC024940.4-201ENST00000605507 246 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AL354976.1-201ENST00000613843 387 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC079248.2-201ENST00000623779 326 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC145207.9-201ENST00000623802 325 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC004158.1-201ENST00000564508 4319 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 CDC27P2-201ENST00000425026 1922 ntBASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.11□□□□□ -1.43
PTPDC1A2A3K4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 AL137100.1-201ENST00000556703 1620 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 AC073429.2-201ENST00000569694 1444 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 SNORA17.1-201ENST00000362945 126 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 RNU6-1339P-201ENST00000363574 91 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 RNU4-4P-201ENST00000364588 130 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 RNU6-98P-201ENST00000384173 107 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 MIR320B1-201ENST00000390209 79 ntBASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.1□□□□□ -1.43
PTPDC1A2A3K4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms