Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC093698.1-201ENST00000423843 571 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 RPS29P14-201ENST00000431518 171 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 ZNF965P-201ENST00000432501 817 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 VN1R32P-201ENST00000452234 905 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 HMGB3P21-201ENST00000452483 547 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC234781.3-201ENST00000452540 973 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AL389915.2-201ENST00000454576 441 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 OR52A4P-201ENST00000472867 958 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 MTND6P6-201ENST00000478031 263 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 OR9N1P-202ENST00000494289 481 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC108693.1-201ENST00000496068 432 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 HAUS1P3-201ENST00000523909 662 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC107016.1-201ENST00000550463 337 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC009101.1-201ENST00000568135 242 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC005242.1-201ENST00000585658 438 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC022726.1-201ENST00000587475 207 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC073137.1-201ENST00000605636 634 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC017076.1-201ENST00000607613 578 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AL355802.4-201ENST00000607635 548 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC239803.2-201ENST00000610161 430 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC126175.1-201ENST00000617041 758 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AP003072.4-201ENST00000624580 310 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AL627171.1-201ENST00000618845 1308 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 AC009501.3-201ENST00000605001 1352 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 Z82217.1-201ENST00000625157 8149 ntBASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
KCNIP3Q9Y2W7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC095050.2-201ENST00000510748 1458 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 SNURFL-201ENST00000309296 343 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 IGKV7-3-201ENST00000357453 298 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 RNA5SP178-201ENST00000410380 128 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 BMS1P13-201ENST00000417301 885 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 MTND4P24-201ENST00000424002 397 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 RSL24D1P8-201ENST00000434442 492 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL031663.1-201ENST00000437445 219 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 RPS15AP29-201ENST00000445539 400 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 H2AFZP5-201ENST00000446960 382 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 MTND2P8-201ENST00000450555 1025 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 HIGD1AP8-201ENST00000453927 274 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 TPRKBP1-201ENST00000456243 481 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC092045.1-201ENST00000495716 1231 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 SNRPCP2-201ENST00000504370 475 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AP002812.4-201ENST00000532139 286 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC027176.2-201ENST00000559166 746 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 ADAD1P2-201ENST00000588476 646 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC015849.2-201ENST00000605738 409 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC012467.1-201ENST00000607740 256 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL355816.1-201ENST00000607951 118 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL096803.3-201ENST00000609032 532 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC126915.2-201ENST00000610957 190 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AC079395.2-201ENST00000610982 737 ntBASIC3.82□□□□□ -1.8
KCNIP3Q9Y2W7 AL359715.5-201ENST00000623431 443 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms