Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RNA5SP246-201ENST00000458909 119 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RN7SL810P-201ENST00000493031 276 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RFPL4AP5-201ENST00000514977 504 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC074050.1-201ENST00000563247 211 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC110743.1-201ENST00000584870 478 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RNU1-14P-201ENST00000362759 152 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 RPL32P23-201ENST00000397237 405 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 UBE2V1P3-201ENST00000439651 417 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 SERPINA7P1-201ENST00000443077 631 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 SEPT7P3-201ENST00000455017 621 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC108064.1-201ENST00000513791 460 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 OR5BC1P-201ENST00000529327 739 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC084824.1-201ENST00000550917 1005 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC022916.3-201ENST00000592961 742 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC074276.2-201ENST00000619891 348 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 MIR7702-201ENST00000621931 59 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC055839.1-201ENST00000634467 498 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 ERCC6-202ENST00000374127 1782 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 AC139769.1-204ENST00000472297 1931 ntBASIC4.02□□□□□ -1.77
CCDC88CQ9P219 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC88CQ9P219 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC104118.1-201ENST00000607625 1589 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 RNU6-249P-201ENST00000363016 102 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 RNU4-44P-201ENST00000363050 141 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 SNORA11-201ENST00000408789 128 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 RPL17P36-201ENST00000420302 549 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 RPL23AP89-201ENST00000439324 255 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 HSFY6P-201ENST00000445573 403 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC022882.1-201ENST00000532142 501 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 YPEL5P3-201ENST00000547227 352 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC011477.5-201ENST00000586571 259 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC112484.5-201ENST00000624189 228 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 AC000123.3-201ENST00000624029 4975 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 OR51H2P-202ENST00000641424 3046 ntBASIC4.01□□□□□ -1.77
CCDC88CQ9P219 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC88CQ9P219 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 SPRR2C-201ENST00000290702 219 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC88CQ9P219 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4□□□□□ -1.77
CCDC88CQ9P219 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC108022.1-201ENST00000493466 478 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AC025445.1-201ENST00000502728 300 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC027176.2-201ENST00000559166 746 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4□□□□□ -1.77
CCDC88CQ9P219 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 AL020997.2-201ENST00000602607 184 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC88CQ9P219 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC009951.1-201ENST00000623674 2614 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms