Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC079097.1-201ENST00000512187 1399 ntBASIC5.66□□□□□ -1.5
VPS11Q9H270 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS11Q9H270 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS11Q9H270 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 RNU6-1119P-201ENST00000384349 108 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC092638.1-201ENST00000411966 1275 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 NPM1P22-201ENST00000427761 952 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC126120.1-201ENST00000431082 470 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL358876.1-201ENST00000453364 1075 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 RN7SL188P-201ENST00000469842 285 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC126182.1-201ENST00000478134 357 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 EIF3LP3-201ENST00000495197 822 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC005912.1-201ENST00000495392 255 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 OR5H5P-201ENST00000503164 928 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS11Q9H270 CDC42P4-201ENST00000510507 563 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC074255.1-201ENST00000511259 501 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 RNA5SP303-201ENST00000516192 130 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 IGKV3D-25-201ENST00000519599 235 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AP003396.4-201ENST00000527574 265 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC118273.2-201ENST00000532092 465 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 OR5AM1P-201ENST00000532136 1032 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC087897.1-201ENST00000550134 156 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AL121579.1-201ENST00000555129 305 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC006530.1-201ENST00000555980 571 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC245505.1-201ENST00000556398 224 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC084757.1-201ENST00000559987 490 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC090695.1-201ENST00000561269 1222 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC002400.1-201ENST00000569310 726 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 RBM22P1-201ENST00000578589 1214 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC087683.1-201ENST00000591187 441 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 VN1R84P-201ENST00000593697 235 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS11Q9H270 VN1R82P-201ENST00000601481 356 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AL020997.3-201ENST00000602843 359 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC006363.1-201ENST00000603806 463 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC008945.2-201ENST00000606056 604 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC008498.1-201ENST00000613012 531 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS11Q9H270 AC004009.2-201ENST00000623016 728 ntBASIC5.65□□□□□ -1.5
VPS11Q9H270 AC009313.2-201ENST00000417893 1941 ntBASIC5.65□□□□□ -1.51
VPS11Q9H270 AC027088.4-201ENST00000611559 1947 ntBASIC5.65□□□□□ -1.51
VPS11Q9H270 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS11Q9H270 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
VPS11Q9H270 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS11Q9H270 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.65□□□□□ -1.51
VPS11Q9H270 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS11Q9H270 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS11Q9H270 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS11Q9H270 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS11Q9H270 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS11Q9H270 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.65□□□□□ -1.51
VPS11Q9H270 NCLP2-201ENST00000416078 1462 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS11Q9H270 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 Y_RNA.359-201ENST00000365498 102 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms