Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC087359.1-201ENST00000508335 1740 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC020633.1-201ENST00000468439 2247 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 SNORA64.1-201ENST00000362600 132 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 OR1L6-202ENST00000373684 1044 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 Y_RNA.560-201ENST00000384689 102 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL391361.1-201ENST00000405580 489 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 NRBF2P2-201ENST00000413087 861 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC093155.2-201ENST00000420734 937 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 GAPDHP49-201ENST00000421421 961 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 REREP1Y-201ENST00000422655 198 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 REREP2Y-201ENST00000439103 200 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 GTF3AP5-201ENST00000442645 697 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 TAF9P1-201ENST00000445421 515 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 MTND2P19-201ENST00000449129 1012 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 TPMTP4-201ENST00000450749 678 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL606490.1-201ENST00000452266 765 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 TAF9P2-201ENST00000454958 515 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC245028.2-201ENST00000458673 253 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 RPS26P39-201ENST00000469206 341 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 RN7SL583P-201ENST00000475692 287 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL049874.2-201ENST00000492636 288 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 MYL12BP2-201ENST00000503948 512 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC108043.1-201ENST00000512696 574 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 IGKV2D-10-201ENST00000520194 281 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC022404.1-201ENST00000555320 273 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 MIR4700-201ENST00000578311 74 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 SNORD95-201ENST00000579879 68 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC127024.5-201ENST00000580085 462 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 PRPF19P1-201ENST00000584766 898 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AP001981.2-201ENST00000603241 418 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AP000811.1-201ENST00000603803 651 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 RN7SL787P-201ENST00000613000 284 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AP005431.1-201ENST00000618479 319 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 uc_338.7-201ENST00000621834 124 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 MTND4P31-201ENST00000425607 1343 ntBASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.11□□□□□ -1.59
AMBRA1Q9C0C7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 SNORA62.2-201ENST00000364672 152 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-192P-201ENST00000391253 100 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 TAF9BP1-201ENST00000396646 746 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AL031577.2-201ENST00000404133 280 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AL136131.1-201ENST00000406079 803 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RPL12P9-201ENST00000412942 488 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 P2RY10P2-201ENST00000416730 913 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC127526.2-201ENST00000426436 775 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AL022331.1-201ENST00000429025 477 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms