Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC127024.5-201ENST00000580085 462 ntBASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 MIR4737-201ENST00000583979 81 ntBASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 AL021368.1-201ENST00000607490 540 ntBASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 FRG1HP-204ENST00000617940 757 ntBASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHMP4AQ9BY43 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 OR11H5P-202ENST00000641612 1325 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 ASNSP1-204ENST00000641977 1664 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 RNA5SP87-201ENST00000384155 118 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 RPS24P12-201ENST00000402084 394 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 U3.32-201ENST00000408116 212 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 GTF2IP5-201ENST00000414608 731 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC004448.2-201ENST00000422360 586 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC073508.1-201ENST00000428866 656 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 OR52J1P-201ENST00000450596 932 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AL035407.2-201ENST00000454090 378 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC105031.1-201ENST00000518550 476 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 RPL23AP53-201ENST00000521854 457 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 SERPINE4P-201ENST00000554978 281 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC009117.1-201ENST00000563948 554 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 ADAD1P2-201ENST00000588476 646 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 BNIP3P32-201ENST00000600015 554 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC069304.3-201ENST00000603938 1084 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC104687.2-201ENST00000604442 342 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 IMMP1LP1-201ENST00000605170 488 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC017104.5-201ENST00000637647 639 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 AC053481.2-202ENST00000582394 1500 ntBASIC6.34□□□□□ -1.39
CHMP4AQ9BY43 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CHMP4AQ9BY43 AC073429.2-201ENST00000569694 1444 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AL450345.1-202ENST00000605741 3881 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 RN7SKP44-201ENST00000363602 316 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 USP9YP9-201ENST00000429406 715 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 RPS3AP53-201ENST00000454716 778 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 RPS17P2-201ENST00000461663 408 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC021660.1-201ENST00000465006 554 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC008565.1-201ENST00000509046 885 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC104108.1-201ENST00000509930 412 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 ENPP7P9-201ENST00000514456 627 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC008494.2-201ENST00000514544 370 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 OR8K2P-201ENST00000524645 927 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 C1DP5-201ENST00000525775 383 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC022882.1-201ENST00000532142 501 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC005191.1-201ENST00000603950 358 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC116651.1-201ENST00000609724 556 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AP001784.1-201ENST00000624107 428 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHMP4AQ9BY43 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHMP4AQ9BY43 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms