Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC099786.3-201ENST00000565735 1410 ntBASIC5.75□□□□□ -1.49
SALL3Q9BXA9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SALL3Q9BXA9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SALL3Q9BXA9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SALL3Q9BXA9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SALL3Q9BXA9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SALL3Q9BXA9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SALL3Q9BXA9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RNU5B-4P-201ENST00000363508 111 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RNA5SP151-201ENST00000365632 117 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC098592.2-201ENST00000413158 265 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC016907.1-201ENST00000419483 435 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC008072.1-201ENST00000434254 824 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 MTCYBP29-201ENST00000436327 1006 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 MTCYBP21-201ENST00000443300 1113 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RPL31P20-201ENST00000449593 360 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RPL7P55-201ENST00000450522 746 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC092324.1-201ENST00000468671 324 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC134050.1-201ENST00000495088 933 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC026782.2-201ENST00000510845 636 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 BRD9P1-201ENST00000529855 560 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 OR5D15P-201ENST00000531671 942 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC023050.2-201ENST00000544968 387 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC104785.1-201ENST00000603220 588 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 Z99497.2-201ENST00000603634 310 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LSM1P2-201ENST00000604911 322 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AP003497.2-201ENST00000624220 967 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 KARSP3-201ENST00000571212 1504 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC021755.1-201ENST00000559747 1447 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC131971.1-201ENST00000332881 1482 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC125257.1-201ENST00000560400 2930 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 TRIM60P17-201ENST00000415181 719 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC096644.3-201ENST00000416788 338 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 FABP5P3-201ENST00000437960 408 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 CYCSP34-201ENST00000458172 304 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC112206.1-201ENST00000468416 477 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 FABP5P6-201ENST00000510588 409 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RNA5SP446-201ENST00000515955 82 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RNU6-513P-201ENST00000516104 104 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RN7SKP276-201ENST00000516242 268 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC090819.1-201ENST00000523800 1111 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 CCDC58P3-201ENST00000590792 430 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC079880.2-201ENST00000603790 1213 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 HMGB1P51-201ENST00000605166 638 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC073137.1-201ENST00000605636 634 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.74□□□□□ -1.49
SALL3Q9BXA9 LINC02211-204ENST00000642024 1070 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 BX649567.1-201ENST00000642071 1134 ntBASIC5.74□□□□□ -1.49
SALL3Q9BXA9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 MFSD8-216ENST00000641147 4009 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AP001642.1-201ENST00000624727 2117 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms