Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 RPL12P18-201ENST00000437175 325 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 MTND2P22-201ENST00000444325 1033 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 TPT1P13-201ENST00000449760 499 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC009220.1-201ENST00000451614 275 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 MTCO3P35-201ENST00000485582 781 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 CEACAMP10-202ENST00000495431 496 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 HAUS1P3-201ENST00000523909 662 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 OR8K4P-201ENST00000534608 872 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC133555.2-201ENST00000550213 292 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 MIR4270-201ENST00000581799 70 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC040904.1-201ENST00000590850 223 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 GAS5-AS1-201ENST00000602767 694 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC022022.2-201ENST00000602989 360 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AL161616.1-201ENST00000611867 286 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC004232.3-201ENST00000622977 525 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 AC019080.5-201ENST00000624891 757 ntBASIC4.83□□□□□ -1.64
RTP4Q96DX8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP4Q96DX8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP4Q96DX8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AL359715.4-201ENST00000606629 1436 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC010132.2-201ENST00000295493 1043 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 RNU6-468P-201ENST00000384003 109 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 MIR141-201ENST00000384975 95 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 TAS2R15P-201ENST00000390674 928 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 HMGB3P19-201ENST00000403971 560 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 ZNF602P-201ENST00000405929 924 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 VDAC1P9-201ENST00000412766 841 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC092648.1-201ENST00000425870 423 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 MTCO1P53-201ENST00000441633 699 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AL157884.3-201ENST00000448273 1184 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AL627224.1-201ENST00000448334 444 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 OR52J1P-201ENST00000450596 932 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC239798.3-201ENST00000454459 408 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AL122001.1-201ENST00000457027 370 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC063943.1-201ENST00000465434 453 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 DEFB109F-201ENST00000491870 277 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC008897.1-201ENST00000494006 347 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 RPS4XP18-201ENST00000495480 763 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 SUMO2P4-201ENST00000504193 276 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC005351.1-201ENST00000511152 786 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 UBE2FP2-201ENST00000566646 462 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC099785.1-201ENST00000605697 437 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 FAM27B-201ENST00000610601 213 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 RMST_5.1-201ENST00000618704 126 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC132825.7-201ENST00000638744 335 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 AC245100.2-201ENST00000454544 1679 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP4Q96DX8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RTP4Q96DX8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.82□□□□□ -1.64
RTP4Q96DX8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms