Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC092162.1-201ENST00000432828 434 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 UBDP1-202ENST00000457888 382 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RPL23AP37-201ENST00000479658 549 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RN7SL323P-201ENST00000494712 295 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 Z95327.2-201ENST00000414579 1873 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 MT-RNR1-201ENST00000389680 954 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 MIR3065-201ENST00000390137 79 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 Z92545.1-201ENST00000411782 234 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OR4K6P-201ENST00000416478 897 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 TXNP2-201ENST00000443918 295 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL139395.1-201ENST00000603662 160 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC012078.1-201ENST00000405035 1646 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OFD1P9Y-201ENST00000417699 1491 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL022393.1-201ENST00000625142 1677 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RPS27AP11-201ENST00000402798 447 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 TBCAP2-201ENST00000416175 326 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 SCARNA14-201ENST00000516903 136 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RPL21P12-201ENST00000559810 515 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC005255.1-201ENST00000593748 216 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL160281.1-201ENST00000605307 311 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC018690.1-201ENST00000608144 626 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 MIR8059-201ENST00000620427 81 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC021242.1-201ENST00000507315 2035 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC000374.1-201ENST00000434698 1745 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC008033.1-201ENST00000216407 1162 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 PTMAP5-201ENST00000393073 333 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL356095.1-201ENST00000417217 199 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL132765.1-201ENST00000434165 553 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RPL35AP21-201ENST00000437667 333 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC015912.2-201ENST00000571053 181 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL353600.1-201ENST00000608148 251 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 MGP-201ENST00000228938 694 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ARAFP2-201ENST00000440565 559 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC022336.1-201ENST00000475510 337 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC022133.1-201ENST00000490961 571 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 PANCR-201ENST00000503456 493 ntTSL 5 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 PARP4P3-201ENST00000510265 317 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 KRT19P6-201ENST00000510983 209 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 ASNSP4-201ENST00000511103 447 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 MIR2116-201ENST00000517221 80 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC105031.1-201ENST00000518550 476 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AC006065.6-201ENST00000625201 545 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 AL022322.2-201ENST00000624072 20397 ntBASIC1.32□□□□□ -2.2
SYNE1Q8NF91 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC1.32□□□□□ -2.2
SYNE1Q8NF91 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms