Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SNORA11.2-201ENST00000408318 127 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RN7SKP100-201ENST00000411258 284 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 ELOCP9-201ENST00000418624 239 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RPF2P1-201ENST00000424137 906 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RAC1P8-201ENST00000427086 527 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 YWHAEP5-201ENST00000431545 765 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RPL34P20-201ENST00000442771 351 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AL359073.1-201ENST00000448036 403 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 NPM1P13-201ENST00000452663 865 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 OSTCP1-201ENST00000455507 450 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNU6-599P-201ENST00000459383 107 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNU6-1193P-201ENST00000459461 107 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 MTCO3P28-201ENST00000513351 515 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNA5SP464-201ENST00000516251 108 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 snoZ278.1-201ENST00000517059 112 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 OR4A2P-201ENST00000527276 913 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AL049779.3-201ENST00000557141 606 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC007224.1-201ENST00000564410 144 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 MIR4429-201ENST00000580105 73 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC015688.2-201ENST00000584523 262 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AP001269.3-201ENST00000588718 329 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC040904.1-201ENST00000590850 223 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 VN1R85P-201ENST00000601587 426 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNU6-368P-201ENST00000620928 107 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNU6-538P-201ENST00000622329 107 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC145207.9-201ENST00000623802 325 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC068137.4-201ENST00000638485 296 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 AC022164.1-201ENST00000568767 2673 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 IGKV7-3-201ENST00000357453 298 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 RNU1-146P-201ENST00000364015 165 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 MIR525-201ENST00000384978 85 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL356131.1-201ENST00000405826 414 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL592293.2-201ENST00000422292 996 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 EI24P4-201ENST00000423683 1078 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC092651.1-201ENST00000426110 312 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL590399.2-201ENST00000427536 309 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 ATG12P2-201ENST00000456830 416 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 SNORA84-201ENST00000459229 133 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC092754.1-201ENST00000472975 479 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 RNU5A-4P-201ENST00000516588 111 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AP000926.4-201ENST00000527351 454 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC034105.4-201ENST00000568304 277 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC005252.1-201ENST00000604518 1063 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC080013.6-201ENST00000606185 215 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL583856.2-201ENST00000606298 543 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 AL356274.1-201ENST00000617064 410 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms