Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC092324.1-201ENST00000468671 324 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 RN7SL354P-201ENST00000469282 294 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 RPL23AP71-201ENST00000470966 469 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 UBA52P3-201ENST00000491303 382 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 EIF1AXP2-201ENST00000555940 413 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 AL133243.1-201ENST00000614487 366 ntBASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC50Q8IVM0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC010132.2-201ENST00000295493 1043 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC019155.1-201ENST00000382242 574 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 MIR1911-201ENST00000410783 80 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AMD1P2-201ENST00000412936 992 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC006455.6-201ENST00000426192 893 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 RPEP2-201ENST00000432149 701 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 HMGB3P10-201ENST00000434734 572 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 RPL36AP15-201ENST00000444514 266 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 CEACAMP6-201ENST00000452007 574 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 RPL35AP28-201ENST00000459730 331 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 LARP7P4-201ENST00000481075 878 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC105233.1-201ENST00000498840 781 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AL049874.4-201ENST00000557593 255 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC124068.1-201ENST00000563131 678 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AL360157.1-201ENST00000565962 87 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC50Q8IVM0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 LINC02471-203ENST00000641941 4752 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 RN7SKP103-201ENST00000363848 320 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 RNU6-178P-201ENST00000384631 104 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 RNA5SP397-201ENST00000391323 118 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 RPS23P10-201ENST00000416185 486 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC092647.1-201ENST00000420654 287 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC007394.1-201ENST00000421941 531 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AP000936.3-201ENST00000438127 255 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 HMGN1P8-201ENST00000463578 288 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC083829.1-201ENST00000503756 657 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms