Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 BNIP3P27-201ENST00000599991 412 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC018645.2-201ENST00000609151 472 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL627230.1-201ENST00000613077 211 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL591926.8-201ENST00000616876 211 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC091905.4-201ENST00000623432 202 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC093875.1-201ENST00000623688 504 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC010872.1-201ENST00000624225 675 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MFSD8-213ENST00000641134 1327 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AP002530.1-201ENST00000405705 684 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 HNRNPDP2-201ENST00000406475 478 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC004022.2-201ENST00000413824 193 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC023128.2-201ENST00000420880 1223 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 BRWD1P3-201ENST00000428816 390 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 MRPL50P1-201ENST00000431951 384 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 TXNP5-201ENST00000441043 315 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AL096829.2-201ENST00000446582 742 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 TCEA1P1-201ENST00000449716 880 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 RN7SL319P-201ENST00000480656 221 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC090686.1-201ENST00000481577 749 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 RN7SL808P-201ENST00000496066 299 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 MTCO3P27-201ENST00000514397 196 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AP000916.1-201ENST00000533869 835 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC006518.1-201ENST00000541449 943 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 TVP23CP2-201ENST00000571473 623 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC011487.3-201ENST00000593607 453 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC133794.1-201ENST00000602731 914 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AP003117.1-201ENST00000602771 554 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC021851.1-201ENST00000608537 1082 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC245100.7-201ENST00000609678 442 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AP005229.2-201ENST00000609980 697 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC008759.3-201ENST00000613300 508 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AL035461.2-201ENST00000619201 524 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
NUP54Q7Z3B4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC100778.3-201ENST00000580060 1750 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 SNORD56.4-201ENST00000363883 71 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 OR52E6-202ENST00000379946 954 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AL589647.1-201ENST00000402485 466 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AL021331.1-201ENST00000402817 582 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC013429.2-201ENST00000418798 781 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC008173.1-201ENST00000418901 264 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AL450023.3-201ENST00000440592 271 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AL137845.2-201ENST00000444292 988 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC140172.1-201ENST00000502928 141 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AP003355.1-201ENST00000518956 587 ntBASIC4.6□□□□□ -1.67
NUP54Q7Z3B4 AC008562.1-201ENST00000521763 330 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms