Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CYCSP29-201ENST00000533731 318 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AP001804.2-201ENST00000533932 910 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC027176.2-201ENST00000559166 746 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 MIR3160-1-201ENST00000577972 85 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC103792.1-201ENST00000603591 919 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC242628.1-201ENST00000606810 391 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AL355802.4-201ENST00000607635 548 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC097505.1-201ENST00000610199 565 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 MIR492-201ENST00000638676 116 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AL158163.1-201ENST00000603915 1649 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 TRIM60P17-201ENST00000415181 719 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC073508.1-201ENST00000428866 656 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 RPL7P19-201ENST00000469948 618 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC016687.1-201ENST00000482574 353 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC016550.1-201ENST00000505348 785 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC108475.1-201ENST00000507880 950 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 BTG4P1-201ENST00000510421 183 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC025884.1-201ENST00000556034 378 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC011477.5-201ENST00000586571 259 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 SNORD91B-202ENST00000608459 222 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 FAM27D1-201ENST00000612308 341 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC007546.1-201ENST00000619452 559 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC007546.2-201ENST00000623996 360 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 AC083843.3-201ENST00000623679 2186 ntBASIC5.29□□□□□ -1.56
PDS5AQ29RF7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDS5AQ29RF7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL512326.1-201ENST00000443050 721 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 NUTF2P3-201ENST00000448540 384 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 RPL23AP65-201ENST00000475608 468 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AC010374.1-201ENST00000503762 1237 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AP003102.1-201ENST00000525638 661 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 IPO5P1-202ENST00000600039 287 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 MIR8059-201ENST00000620427 81 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AP006248.3-201ENST00000623580 594 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AP003497.2-201ENST00000624220 967 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AP001002.2-201ENST00000625137 386 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms