Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.47□□□□□ -1.69
EFNB3Q15768 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EFNB3Q15768 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
EFNB3Q15768 THAP12P4-201ENST00000528321 2266 ntBASIC4.47□□□□□ -1.69
EFNB3Q15768 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EFNB3Q15768 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
EFNB3Q15768 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
EFNB3Q15768 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EFNB3Q15768 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.46□□□□□ -1.69
EFNB3Q15768 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
EFNB3Q15768 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC006042.3-201ENST00000454684 1469 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RN7SKP224-201ENST00000364140 325 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RNA5SP90-201ENST00000364801 99 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 RNU6-317P-201ENST00000384031 107 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 SNORA40.2-201ENST00000390847 128 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL645733.1-201ENST00000402250 217 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 ERHP2-201ENST00000402323 299 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL589647.1-201ENST00000402485 466 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL133270.1-201ENST00000402635 279 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RN7SKP125-201ENST00000410481 302 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 GAPDHP49-201ENST00000421421 961 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL590609.2-201ENST00000421430 368 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 EI24P4-201ENST00000423683 1078 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 CNOT7P1-201ENST00000429006 852 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 SETP8-201ENST00000435341 628 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 HMGB1P45-201ENST00000435986 653 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC007327.1-201ENST00000447461 264 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RHEBP2-201ENST00000450289 600 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC090114.3-201ENST00000479267 829 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RN7SL826P-201ENST00000479724 288 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL161747.1-201ENST00000480068 358 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 MTND2P14-201ENST00000482139 351 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC093270.2-201ENST00000486157 792 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 NDUFA5P12-201ENST00000503796 343 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 SNORA3.4-201ENST00000515969 96 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 snoU109.6-201ENST00000516831 118 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RN7SKP260-201ENST00000516907 149 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 RNA5SP230-201ENST00000517039 122 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC009094.1-201ENST00000564443 426 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 MIR5708-201ENST00000579723 85 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 MIR4666A-201ENST00000580160 79 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 MIR4646-201ENST00000580775 63 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 MIR4660-201ENST00000583549 74 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC021171.1-201ENST00000603137 706 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC108738.1-201ENST00000603703 237 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC097478.2-201ENST00000610572 514 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC024257.5-201ENST00000612739 531 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AL353726.1-201ENST00000614041 1000 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC023509.5-201ENST00000617434 807 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC091304.6-201ENST00000619761 202 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 CU459211.1-201ENST00000635667 749 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 AC087821.2-201ENST00000637086 450 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 MFSD8-245ENST00000641743 948 ntBASIC4.46□□□□□ -1.7
EFNB3Q15768 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.46□□□□□ -1.7
EFNB3Q15768 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.46□□□□□ -1.7
EFNB3Q15768 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFNB3Q15768 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
EFNB3Q15768 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.45□□□□□ -1.7
EFNB3Q15768 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
EFNB3Q15768 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.45□□□□□ -1.7
EFNB3Q15768 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
EFNB3Q15768 OR9G4-201ENST00000302957 984 ntBASIC4.45□□□□□ -1.7
EFNB3Q15768 SNURFL-201ENST00000309296 343 ntBASIC4.45□□□□□ -1.7
EFNB3Q15768 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
EFNB3Q15768 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
EFNB3Q15768 SNORA48.4-201ENST00000391089 134 ntBASIC4.45□□□□□ -1.7
EFNB3Q15768 LRRC37BP1-201ENST00000398851 714 ntBASIC4.45□□□□□ -1.7
EFNB3Q15768 AL512430.2-201ENST00000406786 339 ntBASIC4.45□□□□□ -1.7
EFNB3Q15768 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms