Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.67□□□□□ -1.66
LTBQ06643 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 AC021483.2-201ENST00000567415 758 ntBASIC4.67□□□□□ -1.66
LTBQ06643 MIR4789-201ENST00000577469 82 ntBASIC4.67□□□□□ -1.66
LTBQ06643 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 AL035411.2-201ENST00000604022 421 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AP005432.2-201ENST00000608162 586 ntBASIC4.67□□□□□ -1.66
LTBQ06643 AC096586.1-201ENST00000610267 561 ntBASIC4.67□□□□□ -1.66
LTBQ06643 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 AP000676.3-201ENST00000623299 569 ntBASIC4.67□□□□□ -1.66
LTBQ06643 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 AC007382.1-201ENST00000624376 2618 ntBASIC4.67□□□□□ -1.66
LTBQ06643 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LTBQ06643 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LTBQ06643 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 AC010266.2-201ENST00000564741 3255 ntBASIC4.66□□□□□ -1.66
LTBQ06643 HSPD1P11-201ENST00000508643 1702 ntBASIC4.66□□□□□ -1.66
LTBQ06643 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.66□□□□□ -1.66
LTBQ06643 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LTBQ06643 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LTBQ06643 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LTBQ06643 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 RNU1-32P-201ENST00000363937 159 ntBASIC4.66□□□□□ -1.66
LTBQ06643 RNU1-43P-201ENST00000365052 165 ntBASIC4.66□□□□□ -1.66
LTBQ06643 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 SNORA67-201ENST00000384423 137 ntBASIC4.66□□□□□ -1.66
LTBQ06643 SNORD116-12-201ENST00000384468 92 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 U3.32-201ENST00000408116 212 ntBASIC4.66□□□□□ -1.66
LTBQ06643 MIR1182-201ENST00000408363 97 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC016712.1-201ENST00000431088 378 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.66□□□□□ -1.66
LTBQ06643 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 AL589880.1-201ENST00000448271 287 ntBASIC4.66□□□□□ -1.66
LTBQ06643 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 AC098583.1-201ENST00000480875 255 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC011037.1-201ENST00000483964 558 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC091951.3-201ENST00000504093 246 ntBASIC4.66□□□□□ -1.66
LTBQ06643 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 AC097173.1-201ENST00000505862 819 ntBASIC4.66□□□□□ -1.66
LTBQ06643 SLC25A15P5-201ENST00000508033 253 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC021146.7-201ENST00000509604 775 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 Y_RNA.655-201ENST00000515919 96 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 OR8A2P-201ENST00000528631 952 ntBASIC4.66□□□□□ -1.66
LTBQ06643 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.66□□□□□ -1.66
LTBQ06643 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 AC023050.2-201ENST00000544968 387 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC087897.1-201ENST00000550134 156 ntBASIC4.66□□□□□ -1.66
LTBQ06643 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 ATP5J2P6-201ENST00000565203 266 ntBASIC4.66□□□□□ -1.66
LTBQ06643 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 AC069366.1-201ENST00000583159 838 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC012254.4-201ENST00000588843 273 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.66□□□□□ -1.66
LTBQ06643 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 BMS1P7-201ENST00000602440 1052 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AC067838.1-201ENST00000606064 577 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 AC090527.3-201ENST00000619041 548 ntBASIC4.66□□□□□ -1.66
LTBQ06643 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.66□□□□□ -1.66
LTBQ06643 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 LINC01739-205ENST00000641890 573 ntBASIC4.66□□□□□ -1.66
LTBQ06643 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LTBQ06643 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.66□□□□□ -1.66
LTBQ06643 AC107021.2-201ENST00000567714 2095 ntBASIC4.66□□□□□ -1.66
LTBQ06643 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LTBQ06643 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LTBQ06643 AP001284.1-201ENST00000528393 2118 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms