Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ACTBP60709 AC139769.1-204ENST00000472297 1931 ntBASIC3.85□□□□□ -1.79
ACTBP60709 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ACTBP60709 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ACTBP60709 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 U3.15-201ENST00000365398 212 ntBASIC3.85□□□□□ -1.79
ACTBP60709 SNORA51.8-201ENST00000384234 132 ntBASIC3.85□□□□□ -1.79
ACTBP60709 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 AC136624.1-201ENST00000400791 413 ntBASIC3.85□□□□□ -1.79
ACTBP60709 RN7SKP267-201ENST00000410381 285 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.85□□□□□ -1.79
ACTBP60709 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 CACYBPP1-201ENST00000438592 684 ntBASIC3.85□□□□□ -1.79
ACTBP60709 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.85□□□□□ -1.79
ACTBP60709 AC104306.1-201ENST00000449702 371 ntBASIC3.85□□□□□ -1.79
ACTBP60709 OR52J1P-201ENST00000450596 932 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AC010733.1-201ENST00000451515 401 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AURKAPS2-201ENST00000454983 333 ntBASIC3.85□□□□□ -1.79
ACTBP60709 RN7SL329P-201ENST00000467740 299 ntBASIC3.85□□□□□ -1.79
ACTBP60709 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.85□□□□□ -1.79
ACTBP60709 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.85□□□□□ -1.79
ACTBP60709 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.85□□□□□ -1.79
ACTBP60709 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 AC021483.2-201ENST00000567415 758 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 BPIFA4P-203ENST00000603168 689 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AC020634.1-201ENST00000608701 549 ntBASIC3.85□□□□□ -1.79
ACTBP60709 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 AL713922.2-201ENST00000619384 716 ntBASIC3.85□□□□□ -1.79
ACTBP60709 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.85□□□□□ -1.79
ACTBP60709 AP003400.2-201ENST00000624036 666 ntBASIC3.85□□□□□ -1.79
ACTBP60709 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 AC131971.1-201ENST00000332881 1482 ntBASIC3.85□□□□□ -1.79
ACTBP60709 AC100871.1-201ENST00000507871 1456 ntBASIC3.85□□□□□ -1.79
ACTBP60709 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.85□□□□□ -1.79
ACTBP60709 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACTBP60709 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.84□□□□□ -1.79
ACTBP60709 AC025125.1-201ENST00000624743 1922 ntBASIC3.84□□□□□ -1.79
ACTBP60709 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ACTBP60709 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.84□□□□□ -1.79
ACTBP60709 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.84□□□□□ -1.79
ACTBP60709 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 MIR92A2-201ENST00000385299 75 ntBASIC3.84□□□□□ -1.79
ACTBP60709 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.84□□□□□ -1.79
ACTBP60709 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 JKAMPP1-201ENST00000413804 919 ntBASIC3.84□□□□□ -1.79
ACTBP60709 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ACTBP60709 AC093698.1-201ENST00000423843 571 ntBASIC3.84□□□□□ -1.79
ACTBP60709 PSMD10P3-201ENST00000437000 448 ntBASIC3.84□□□□□ -1.79
ACTBP60709 OR1H1P-201ENST00000448731 937 ntBASIC3.84□□□□□ -1.79
ACTBP60709 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 HIGD1AP8-201ENST00000453927 274 ntBASIC3.84□□□□□ -1.79
ACTBP60709 AL356390.1-201ENST00000455684 397 ntBASIC3.84□□□□□ -1.79
ACTBP60709 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.84□□□□□ -1.79
ACTBP60709 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
ACTBP60709 RPL7P16-201ENST00000479738 738 ntBASIC3.84□□□□□ -1.79
ACTBP60709 RPL32P9-201ENST00000487963 407 ntBASIC3.84□□□□□ -1.79
ACTBP60709 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.84□□□□□ -1.79
ACTBP60709 NDUFB5P1-201ENST00000508134 564 ntBASIC3.84□□□□□ -1.79
ACTBP60709 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.84□□□□□ -1.79
ACTBP60709 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.84□□□□□ -1.79
ACTBP60709 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.84□□□□□ -1.79
ACTBP60709 AC022790.1-201ENST00000522872 204 ntBASIC3.84□□□□□ -1.79
ACTBP60709 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.84□□□□□ -1.79
ACTBP60709 PHBP17-201ENST00000528576 541 ntBASIC3.84□□□□□ -1.79
ACTBP60709 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.84□□□□□ -1.79
ACTBP60709 AC087888.1-201ENST00000550884 1254 ntBASIC3.84□□□□□ -1.79
ACTBP60709 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.84□□□□□ -1.79
ACTBP60709 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.84□□□□□ -1.79
ACTBP60709 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.84□□□□□ -1.79
ACTBP60709 AC011453.2-201ENST00000603737 729 ntBASIC3.84□□□□□ -1.79
ACTBP60709 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.84□□□□□ -1.79
ACTBP60709 AL592494.3-201ENST00000609485 464 ntBASIC3.84□□□□□ -1.79
ACTBP60709 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.84□□□□□ -1.79
ACTBP60709 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms