Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC099785.1-201ENST00000605697 437 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC007497.1-201ENST00000610421 561 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AL353726.1-201ENST00000614041 1000 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC243756.2-201ENST00000618406 463 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC126544.2-201ENST00000625174 749 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.88□□□□□ -1.47
RHBDL3P58872 AL627171.1-201ENST00000618845 1308 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDL3P58872 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDL3P58872 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDL3P58872 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDL3P58872 RNU5B-1-201ENST00000363286 116 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 HNRNPDP2-201ENST00000406475 478 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 RN7SKP16-201ENST00000410180 299 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 RNA5SP345-201ENST00000410646 108 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 SETP15-201ENST00000412724 337 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDL3P58872 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 TBCAP2-201ENST00000416175 326 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDL3P58872 NRBF2P3-201ENST00000432731 865 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC023347.2-201ENST00000433994 462 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC005154.2-201ENST00000438110 379 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDL3P58872 AC000041.1-201ENST00000439655 175 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RHBDL3P58872 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDL3P58872 CDC42P1-201ENST00000456658 548 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC092905.1-201ENST00000467527 949 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC006967.1-201ENST00000467608 589 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 NIP7P2-201ENST00000485801 544 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 RN7SKP276-201ENST00000516242 268 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AF186190.1-201ENST00000517470 480 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDL3P58872 AC019227.1-201ENST00000526902 510 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDL3P58872 CYP2C60P-201ENST00000566088 139 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC090666.1-201ENST00000578241 445 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDL3P58872 AL022401.1-201ENST00000619498 108 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AC022306.3-201ENST00000619930 550 ntBASIC5.87□□□□□ -1.47
RHBDL3P58872 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.87□□□□□ -1.47
RHBDL3P58872 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.87□□□□□ -1.47
RHBDL3P58872 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RHBDL3P58872 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RHBDL3P58872 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDL3P58872 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RHBDL3P58872 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDL3P58872 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RHBDL3P58872 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 AC010928.1-201ENST00000592477 1447 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDL3P58872 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RHBDL3P58872 RNU1-32P-201ENST00000363937 159 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 U3.30-201ENST00000391308 210 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC136624.1-201ENST00000400791 413 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 RNU6-77P-201ENST00000410554 91 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDL3P58872 LIPT1P1-201ENST00000415870 1186 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDL3P58872 GAPDHP49-201ENST00000421421 961 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AL645608.4-201ENST00000423619 154 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDL3P58872 OR1H1P-201ENST00000448731 937 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDL3P58872 IFNWP4-201ENST00000453148 294 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDL3P58872 FCF1P6-201ENST00000456841 595 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC096992.1-201ENST00000459808 709 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC104689.1-201ENST00000473356 768 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 RPL23AP72-201ENST00000492447 435 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 RPL30P11-201ENST00000495304 339 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 SCARNA22-201ENST00000503991 125 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDL3P58872 AC008494.2-201ENST00000514544 370 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.86□□□□□ -1.47
RHBDL3P58872 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
RHBDL3P58872 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 OR4U1P-201ENST00000554958 912 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.86□□□□□ -1.47
RHBDL3P58872 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.86□□□□□ -1.47
RHBDL3P58872 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 AC011492.1-201ENST00000600023 315 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 AC018695.5-201ENST00000605872 315 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms