Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN6P56747 DDX18P5-201ENST00000534547 1306 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN6P56747 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN6P56747 ZFRP1-201ENST00000457579 2970 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CLDN6P56747 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLDN6P56747 AC008549.2-201ENST00000333482 706 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN6P56747 OR8G2P-201ENST00000412796 908 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 OR6C64P-201ENST00000419708 825 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 EIF4HP2-201ENST00000424380 563 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 RPL7P2-201ENST00000427639 268 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN6P56747 SERPINA7P1-201ENST00000443077 631 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN6P56747 AC053481.1-201ENST00000467217 306 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AC037198.2-201ENST00000478845 733 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AP002812.1-201ENST00000495378 474 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 snoU109.6-201ENST00000516831 118 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN6P56747 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN6P56747 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN6P56747 AC015922.4-201ENST00000612568 690 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AL356274.1-201ENST00000617064 410 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 AP002967.1-201ENST00000624203 539 ntBASIC4.28□□□□□ -1.72
CLDN6P56747 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN6P56747 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN6P56747 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLDN6P56747 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN6P56747 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 AL445487.1-201ENST00000415694 1580 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 FAM91A3P-201ENST00000456826 2544 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 DHX9P1-201ENST00000436565 3076 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 RNU6-761P-201ENST00000384148 107 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 SNORA68.2-201ENST00000391263 128 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN6P56747 MFSD13B-201ENST00000420133 1290 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 EIF4A1P1-201ENST00000420241 934 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 MTND4LP13-201ENST00000425022 298 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC004938.1-201ENST00000438468 308 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AL035551.1-201ENST00000446931 348 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AL358232.1-201ENST00000448030 501 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AL162151.2-201ENST00000448875 158 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN6P56747 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN6P56747 MIR4444-1-201ENST00000581696 74 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 MIR4444-2-201ENST00000584390 74 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC010615.3-201ENST00000597319 394 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 AC011815.3-201ENST00000624194 473 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AC006065.6-201ENST00000625201 545 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN6P56747 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLDN6P56747 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 AC010300.1-201ENST00000600671 5134 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AL672167.1-205ENST00000641112 3080 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 AL034370.1-201ENST00000397254 1590 ntBASIC4.27□□□□□ -1.73
CLDN6P56747 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN6P56747 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN6P56747 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN6P56747 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 RNU4-44P-201ENST00000363050 141 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 RNA5SP130-201ENST00000364431 114 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 AP000580.1-201ENST00000404439 358 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN6P56747 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN6P56747 AL356095.1-201ENST00000417217 199 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 VN1R37P-201ENST00000419096 748 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 NMNAT1P2-201ENST00000435192 860 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 MRPL48P1-201ENST00000445390 636 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 AC243772.1-201ENST00000451620 410 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN6P56747 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN6P56747 AL132838.2-201ENST00000492041 314 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms