Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGA1P17096 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGA1P17096 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGA1P17096 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGA1P17096 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HMGA1P17096 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
HMGA1P17096 AC125336.1-201ENST00000508893 2827 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGA1P17096 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 RNU6-213P-201ENST00000384051 104 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 RN7SKP202-201ENST00000410439 330 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 RN7SKP159-201ENST00000410657 292 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 CYCSP19-201ENST00000411715 316 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 RPS23P10-201ENST00000416185 486 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 RPL7P2-201ENST00000427639 268 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGA1P17096 RRM2P4-201ENST00000441721 562 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGA1P17096 AC044797.1-201ENST00000445744 679 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 RPS11P1-201ENST00000451072 473 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 RN7SL132P-201ENST00000478131 296 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 RPS4XP15-201ENST00000489210 795 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 TCP11X3P-202ENST00000514289 1254 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 MTND4LP31-201ENST00000514859 294 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 RNU7-143P-201ENST00000516781 65 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGA1P17096 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGA1P17096 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
HMGA1P17096 AC093524.1-201ENST00000564266 1094 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGA1P17096 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGA1P17096 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGA1P17096 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AC034229.5-201ENST00000624258 185 ntBASIC4.25□□□□□ -1.73
HMGA1P17096 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGA1P17096 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HMGA1P17096 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGA1P17096 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGA1P17096 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 AC016588.2-201ENST00000632484 3021 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 DDX18P4-201ENST00000511690 1966 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGA1P17096 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 TCEA1P4-201ENST00000415066 844 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGA1P17096 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGA1P17096 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGA1P17096 HSPE1P16-201ENST00000426640 348 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGA1P17096 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGA1P17096 RAD23BP3-201ENST00000454157 1152 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC092691.2-201ENST00000461787 803 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC091959.2-201ENST00000477363 321 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 RPL21P129-201ENST00000491732 478 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC110792.1-201ENST00000491826 472 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC146944.2-203ENST00000502493 354 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 AC139495.1-202ENST00000513164 354 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 FTH1P11-201ENST00000517577 551 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGA1P17096 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGA1P17096 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 AC120057.2-201ENST00000571520 271 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC025627.2-201ENST00000576220 160 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 AL583832.1-201ENST00000603227 784 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 QTRT1P1-201ENST00000604344 1078 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AL451086.1-201ENST00000605596 223 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 AC090246.1-201ENST00000616499 426 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AC099669.2-201ENST00000616549 437 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AP005264.7-201ENST00000625003 745 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 AC093591.2-201ENST00000565254 3843 ntBASIC4.24□□□□□ -1.73
HMGA1P17096 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGA1P17096 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGA1P17096 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HMGA1P17096 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HMGA1P17096 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGA1P17096 AP001273.1-201ENST00000624493 3152 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 AL607077.1-201ENST00000401718 499 ntBASIC4.23□□□□□ -1.73
HMGA1P17096 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGA1P17096 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGA1P17096 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms