Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC090246.1-201ENST00000616499 426 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AP003485.2-201ENST00000623636 610 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 LINC01739-205ENST00000641890 573 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM38O00635 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 AC107027.3-201ENST00000565095 3473 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 PHKBP1-201ENST00000450951 1951 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM38O00635 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TRIM38O00635 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 RNU4-51P-201ENST00000364206 140 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 Y_RNA.578-201ENST00000390903 88 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AL109941.1-201ENST00000401925 229 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 U3.36-201ENST00000408418 213 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 RPL37P18-201ENST00000411602 243 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 COX5BP7-201ENST00000414780 274 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC009302.1-201ENST00000417147 390 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 MTND2P5-201ENST00000432656 1006 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 AL035246.1-201ENST00000433554 1255 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 PPIAP13-201ENST00000434706 478 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 THAP5P1-201ENST00000439089 262 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 KATNBL1P3-201ENST00000443475 909 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC016772.1-201ENST00000444170 1261 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC005002.1-201ENST00000447458 540 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 MTND1P29-201ENST00000448112 647 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC021660.1-201ENST00000465006 554 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM38O00635 AP000797.2-201ENST00000475768 606 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC109462.1-201ENST00000491087 368 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 MYL12BP2-201ENST00000503948 512 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC110775.1-201ENST00000513721 462 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 RNU6-347P-201ENST00000516658 105 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 DEFB130C-202ENST00000530001 230 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 OR5D15P-201ENST00000531671 942 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 YWHABP2-201ENST00000540201 713 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AL442163.2-201ENST00000553912 710 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM38O00635 MTND4LP24-201ENST00000572277 291 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 PRPF19P1-201ENST00000584766 898 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC234772.3-201ENST00000602277 528 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 PSMA6P4-201ENST00000603247 718 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 RNU4-5P-201ENST00000607255 135 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC013562.2-201ENST00000611632 603 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 VN1R74P-201ENST00000613259 503 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 AC123767.1-202ENST00000620407 817 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AP001005.3-201ENST00000622049 129 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AP002799.1-201ENST00000623552 423 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM38O00635 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRIM38O00635 ATE1-AS1-202ENST00000636460 506 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 OR55B1P-203ENST00000641518 2602 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM38O00635 AC090017.1-201ENST00000548612 1779 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM38O00635 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM38O00635 HSPA8P18-201ENST00000439846 1928 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 AC009229.4-201ENST00000623854 1947 ntBASIC5.31□□□□□ -1.56
TRIM38O00635 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM38O00635 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM38O00635 AC092162.3-201ENST00000624511 1624 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM38O00635 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM38O00635 AL353796.1-201ENST00000561542 3241 ntBASIC5.3□□□□□ -1.56
TRIM38O00635 AC112198.2-201ENST00000426589 6996 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms