Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CYP4A43P-201ENST00000568156 121 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 MEMO1P5-201ENST00000604810 406 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AC112694.2-201ENST00000623697 768 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM1O00151 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM1O00151 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PDLIM1O00151 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDLIM1O00151 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDLIM1O00151 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 GLULP6-201ENST00000399502 913 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AL589647.1-201ENST00000402485 466 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 VN1R8P-201ENST00000407739 893 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 RNA5SP345-201ENST00000410646 108 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 ZFAND6P1-201ENST00000434138 605 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 VN1R54P-201ENST00000435210 1049 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 MTND2P21-201ENST00000436242 1042 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC245517.2-201ENST00000442890 346 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
PDLIM1O00151 PARP4P3-201ENST00000510265 317 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 USP9YP5-201ENST00000511770 630 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AP000676.2-201ENST00000529711 301 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.43□□□□□ -1.7
PDLIM1O00151 MIR4646-201ENST00000580775 63 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC011487.3-201ENST00000593607 453 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC068020.1-201ENST00000594215 661 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC090181.2-201ENST00000602975 672 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC145207.9-201ENST00000623802 325 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 HPVC1-201ENST00000629899 1198 ntBASIC4.43□□□□□ -1.7
PDLIM1O00151 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM1O00151 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM1O00151 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PDLIM1O00151 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
PDLIM1O00151 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 INTS6P1-201ENST00000504674 2530 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDLIM1O00151 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM1O00151 RN7SKP95-201ENST00000362860 303 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 SNORA74A-201ENST00000364089 198 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM1O00151 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM1O00151 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM1O00151 MTND4LP14-201ENST00000429447 288 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 AL353597.2-202ENST00000434901 373 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 CACYBPP1-201ENST00000438592 684 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 TRY2P-201ENST00000448860 689 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 EIF4A1P11-201ENST00000451239 222 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 CALM1P2-201ENST00000452941 448 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM1O00151 AC089999.1-201ENST00000460336 374 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 RN7SL826P-201ENST00000479724 288 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.42□□□□□ -1.7
PDLIM1O00151 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 NPM1P35-201ENST00000533043 868 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 AL731537.2-201ENST00000561565 951 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 AC027455.1-201ENST00000574104 594 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM1O00151 AP004372.1-201ENST00000604842 844 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM1O00151 AC034236.3-201ENST00000605999 461 ntBASIC4.42□□□□□ -1.7
PDLIM1O00151 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM1O00151 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDLIM1O00151 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM1O00151 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM1O00151 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PDLIM1O00151 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM1O00151 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.41□□□□□ -1.7
PDLIM1O00151 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDLIM1O00151 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms