Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 uc_338.18-201ENST00000615451 175 ntBASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 AL121890.3-201ENST00000618494 516 ntBASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGB1P1B2RPK0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC114786.1-201ENST00000512892 1415 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL359922.3-201ENST00000624779 1670 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 SSXP10-201ENST00000402595 565 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC004690.1-201ENST00000418216 328 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC114973.1-201ENST00000429057 632 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC234064.1-201ENST00000436312 247 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL158053.1-201ENST00000441503 453 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 RPS26P56-201ENST00000444468 240 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC017099.1-201ENST00000448261 1028 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC104634.1-201ENST00000452720 462 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 RNU7-140P-201ENST00000459546 60 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC007688.1-201ENST00000475592 759 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC093325.1-201ENST00000508378 326 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC109471.1-201ENST00000511631 612 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC027243.2-201ENST00000602530 724 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC009948.4-201ENST00000604692 675 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC005084.1-201ENST00000605160 304 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL158211.2-201ENST00000607282 395 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 ZNF849P-201ENST00000594711 1566 ntBASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HMGB1P1B2RPK0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 AL672167.1-205ENST00000641112 3080 ntBASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HMGB1P1B2RPK0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC008549.2-201ENST00000333482 706 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 RNA5SP232-201ENST00000364144 119 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 RNU6-441P-201ENST00000384545 106 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL121834.1-202ENST00000404494 277 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 TAF13P2-201ENST00000416876 286 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC115283.1-201ENST00000427353 400 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms