Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL592437.2-201ENST00000421655 2434 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 CTSL3P-202ENST00000412179 788 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 RSU1P3-201ENST00000412878 835 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AL592293.2-201ENST00000422292 996 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC234779.1-201ENST00000425910 285 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AL390879.2-203ENST00000426943 1121 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 FO393419.3-201ENST00000428741 282 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC092447.2-201ENST00000435487 669 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC073143.1-201ENST00000436316 395 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 CEACAMP6-201ENST00000452007 574 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 Z95152.1-201ENST00000453556 656 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC103833.1-201ENST00000517442 172 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 OR8A2P-201ENST00000528631 952 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AP002812.4-201ENST00000532139 286 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC110743.1-201ENST00000584870 478 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC011453.2-201ENST00000603737 729 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC073137.1-201ENST00000605636 634 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC090617.9-201ENST00000623751 147 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC015726.3-201ENST00000624501 418 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC139713.2-214ENST00000642059 1811 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AL137100.1-201ENST00000556703 1620 ntBASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA1Q9Y5H4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHGA1Q9Y5H4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHGA1Q9Y5H4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
PCDHGA1Q9Y5H4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHGA1Q9Y5H4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
PCDHGA1Q9Y5H4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL034370.1-201ENST00000397254 1590 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL592148.3-201ENST00000608771 2646 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 OR52B1P-201ENST00000316506 909 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL590240.1-201ENST00000334118 313 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 SNORA70.10-201ENST00000384515 134 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 RNA5SP397-201ENST00000391323 118 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 TATDN1P1-201ENST00000414123 891 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC004975.1-201ENST00000428733 208 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL353093.1-201ENST00000441292 436 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC010733.1-201ENST00000451515 401 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC010683.1-201ENST00000473673 378 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC104687.1-201ENST00000485829 412 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL049874.2-201ENST00000492636 288 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC134698.5-201ENST00000519444 336 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 OR5M2P-201ENST00000529003 936 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 RN7SL290P-201ENST00000578661 300 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC233702.9-201ENST00000581528 203 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR4472-2-201ENST00000582069 67 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR4512-201ENST00000583257 77 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF92P3-201ENST00000596594 954 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms