Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AL672167.1-205ENST00000641112 3080 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 AC092435.4-201ENST00000623012 4159 ntBASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CLCF1Q9UBD9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC139769.1-204ENST00000472297 1931 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 OR51C1P-202ENST00000641159 1444 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 MIR921-201ENST00000401133 56 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AL445528.1-201ENST00000426330 420 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 RPL21P91-201ENST00000429231 479 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC093716.1-201ENST00000435923 377 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 RPL7P33-201ENST00000444159 742 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 PHBP16-201ENST00000446318 950 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 RPL7P32-201ENST00000457119 744 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 RPS27AP17-201ENST00000463344 455 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC093267.1-201ENST00000489176 961 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 HAUS1P1-201ENST00000505275 832 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC138701.1-201ENST00000524329 714 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 PARP1P2-201ENST00000556806 195 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC090181.2-201ENST00000602975 672 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AL590392.1-201ENST00000604960 446 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC073111.2-201ENST00000605657 1075 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 MIR6716-201ENST00000613413 80 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AL731566.2-201ENST00000618971 317 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC019080.5-201ENST00000624891 757 ntBASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCF1Q9UBD9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLCF1Q9UBD9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.96□□□□□ -1.77
CLCF1Q9UBD9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 MT-TP-201ENST00000387461 68 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 OR6C69P-201ENST00000394268 893 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 SNRPFP1-201ENST00000414761 252 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 BTF3P9-201ENST00000418784 283 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 RSL24D1P6-201ENST00000426934 401 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 MTCYBP29-201ENST00000436327 1006 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 CALM1P2-201ENST00000452941 448 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 CYCSP34-201ENST00000458172 304 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 ACTR6P1-201ENST00000514311 1104 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 RNA5SP497-201ENST00000516081 97 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 RNA5SP464-201ENST00000516251 108 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC022882.1-201ENST00000532142 501 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 HMGB2P1-201ENST00000591146 634 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 MTCO2P22-201ENST00000603246 681 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC084373.1-201ENST00000603311 235 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC079587.1-201ENST00000603846 277 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC233280.2-201ENST00000603917 1070 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC113403.1-201ENST00000604910 193 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC091979.2-201ENST00000607514 214 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL353600.1-201ENST00000608148 251 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL356274.1-201ENST00000617064 410 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL139254.3-201ENST00000641097 674 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL596275.2-204ENST00000641628 552 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 OR52H1-202ENST00000641796 1061 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AL596275.2-206ENST00000641957 626 ntBASIC3.96□□□□□ -1.78
CLCF1Q9UBD9 AC007342.7-201ENST00000624610 2337 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms