Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 NPM1P37-201ENST00000403105 874 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 RPL35AP15-201ENST00000468042 339 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC022336.1-201ENST00000475510 337 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC026726.1-201ENST00000512859 601 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC008126.1-201ENST00000549019 480 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC091178.1-203ENST00000584586 279 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AL161756.2-201ENST00000604597 246 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 COX6CP4-201ENST00000605798 228 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AL121772.2-201ENST00000614331 297 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC008147.4-201ENST00000617570 1204 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AL118508.4-201ENST00000624142 1176 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 AL590396.2-201ENST00000636511 1041 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SNED1Q8TER0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC007068.1-201ENST00000396690 844 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC117434.1-201ENST00000419971 836 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC062016.2-201ENST00000420950 676 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 OR6C71P-201ENST00000432580 913 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 PPIAP13-201ENST00000434706 478 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC084033.1-201ENST00000550830 633 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC016839.1-201ENST00000578162 867 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 RN7SL435P-201ENST00000584418 282 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC007423.1-201ENST00000605009 627 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 AC020978.9-201ENST00000624380 1141 ntBASIC5.21□□□□□ -1.58
SNED1Q8TER0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
SNED1Q8TER0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNED1Q8TER0 NXPH1-205ENST00000602349 1953 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC083837.1-201ENST00000565297 2994 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC003985.2-201ENST00000562268 1669 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC092162.3-201ENST00000624511 1624 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 MAPK10-286ENST00000641208 8747 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC020633.1-201ENST00000468439 2247 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 PROS2P-201ENST00000474651 1951 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 RNA5SP119-201ENST00000362715 117 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 SNORA9-201ENST00000384215 133 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 USP9YP19-201ENST00000412165 485 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 RPS20P14-201ENST00000412545 360 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 RPL7P2-201ENST00000427639 268 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AL035246.1-201ENST00000433554 1255 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC025423.2-201ENST00000537570 439 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 HSPE1P5-201ENST00000561489 272 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 RPAP2P1-201ENST00000603626 1168 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AL160290.3-201ENST00000604869 165 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AL354696.1-201ENST00000614652 497 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 CR392039.5-201ENST00000623201 510 ntBASIC5.2□□□□□ -1.58
SNED1Q8TER0 AP002371.2-201ENST00000624450 503 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms