Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CLIP4Q8N3C7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.67□□□□□ -1.66
CLIP4Q8N3C7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP4Q8N3C7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP4Q8N3C7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RNU1-94P-201ENST00000362627 173 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RN7SKP113-201ENST00000363891 295 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RNU6-636P-201ENST00000384598 107 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 ATP5HP3-201ENST00000396994 486 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 DUTP5-201ENST00000406790 469 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RN7SKP114-201ENST00000410327 279 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 CHEK2P5-201ENST00000423877 246 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RPL23AP4-201ENST00000427757 463 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 OR52B5P-201ENST00000435337 951 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 TMX2P1-201ENST00000436507 708 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 MRPL35P2-201ENST00000448009 511 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AL356981.1-201ENST00000454879 684 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RPL7P39-201ENST00000481157 744 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RPS21P4-201ENST00000487122 248 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RN7SL441P-201ENST00000492388 296 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 RN7SL101P-201ENST00000496350 279 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC025459.1-201ENST00000504072 156 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC013701.1-201ENST00000522657 465 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC104417.1-201ENST00000523974 751 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 MIR8069-1-201ENST00000616627 86 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 AL356274.1-201ENST00000617064 410 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 MIR8069-2-201ENST00000621412 86 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 OR52B5P-202ENST00000641118 1110 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 NXF4-202ENST00000416098 1465 ntBASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP4Q8N3C7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 SCARNA15-201ENST00000607520 4325 ntBASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP4Q8N3C7 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 RNU6-236P-201ENST00000363886 106 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 SNORD116-8-201ENST00000384365 95 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 MCTS2P-201ENST00000394552 546 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC233289.1-201ENST00000403700 508 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC010385.1-201ENST00000412374 256 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL445213.1-201ENST00000412589 747 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 RPS3AP37-201ENST00000419176 745 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 SLC35E1P1-201ENST00000419313 864 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL513175.2-201ENST00000422071 443 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 USP9YP11-201ENST00000427537 717 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 ETF1P3-201ENST00000430422 1160 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC084290.1-201ENST00000434995 374 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 MTCYBP12-201ENST00000440559 1134 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL450023.3-201ENST00000440592 271 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL589880.1-201ENST00000448271 287 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC112492.1-201ENST00000449607 712 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 GTF2IP12-201ENST00000456547 356 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 PSMC1P13-201ENST00000458195 985 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 RPS20P4-201ENST00000461659 355 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC073073.1-201ENST00000493920 463 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms