Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDC42BPAQ5VT25 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.17□□□□□ -1.42
CDC42BPAQ5VT25 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDC42BPAQ5VT25 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.17□□□□□ -1.42
CDC42BPAQ5VT25 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 SNORA60-201ENST00000362396 134 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 U1.1-201ENST00000384101 164 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 RPS26P2-201ENST00000440331 348 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC092691.2-201ENST00000461787 803 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC112206.1-201ENST00000468416 477 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AL139099.1-201ENST00000497398 403 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AP000619.3-201ENST00000535634 1127 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AL606490.9-201ENST00000603331 271 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC233968.1-201ENST00000611212 1300 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 RNA5SP372-201ENST00000390836 115 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AL590704.1-201ENST00000402856 794 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 PHBP17-201ENST00000528576 541 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC064801.1-201ENST00000612025 407 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 AC019278.1-201ENST00000623516 479 ntBASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDC42BPAQ5VT25 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AC006042.3-201ENST00000454684 1469 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AC233289.1-201ENST00000403700 508 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AL050321.1-201ENST00000432363 400 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 OR9M1P-201ENST00000459641 921 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AC018635.1-201ENST00000468292 1030 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 RN7SL323P-201ENST00000494712 295 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AC110768.1-201ENST00000509222 400 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 AC005255.1-201ENST00000593748 216 ntBASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDC42BPAQ5VT25 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 EOGT-210ENST00000615922 1931 ntBASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDC42BPAQ5VT25 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AL161631.1-201ENST00000417933 486 ntBASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 SKP1P3-201ENST00000429280 487 ntBASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AC015726.1-201ENST00000602353 681 ntBASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AF001550.2-201ENST00000636643 217 ntBASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 AP002512.4-202ENST00000641599 4530 ntBASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.14□□□□□ -1.43
CDC42BPAQ5VT25 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AL359643.1-201ENST00000404109 423 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 SNORA57.3-201ENST00000411095 141 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AC008155.2-201ENST00000464337 397 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AC006499.6-201ENST00000511169 607 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 NDUFA5P2-201ENST00000519723 344 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AC138965.3-201ENST00000623875 498 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AC073530.2-201ENST00000623987 261 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AC067931.1-201ENST00000624190 671 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AL031584.1-201ENST00000447169 754 ntBASIC6.13□□□□□ -1.43
CDC42BPAQ5VT25 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms