Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RMST_7.1-201ENST00000621935 268 ntBASIC7.81□□□□□ -1.16
RC3H1Q5TC82 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.81□□□□□ -1.16
RC3H1Q5TC82 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AL589993.1-201ENST00000407450 2524 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 MIR105-2-201ENST00000385083 81 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC008171.1-201ENST00000395058 200 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 BX295541.1-201ENST00000417774 250 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 NPM1P18-201ENST00000434232 732 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC236972.2-201ENST00000434979 310 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC002486.1-201ENST00000435098 391 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 RPL7P48-201ENST00000461513 746 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 PSAT1P4-201ENST00000466500 526 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 RPL7P19-201ENST00000469948 618 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 RPL35P6-201ENST00000490024 372 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC139783.2-201ENST00000504847 1145 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AF131216.2-201ENST00000512316 564 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 IGKV2-18-201ENST00000522607 343 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 BRD9P1-201ENST00000529855 560 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC090424.1-201ENST00000535243 736 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC090651.1-201ENST00000567865 634 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC012254.3-201ENST00000591183 2117 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AL390838.2-201ENST00000602394 274 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 SNRPGP17-201ENST00000603780 214 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC104695.2-201ENST00000605056 775 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 AC105235.1-201ENST00000623208 1816 ntBASIC7.8□□□□□ -1.16
RC3H1Q5TC82 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RC3H1Q5TC82 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC011155.1-201ENST00000316512 456 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 OR11H13P-201ENST00000359695 979 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 Y_RNA.474-201ENST00000384341 102 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 HMGB3P18-201ENST00000406327 590 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AL603766.1-201ENST00000407763 664 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC073136.2-201ENST00000417282 849 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 NENFP1-201ENST00000419476 466 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AL358176.2-201ENST00000425769 204 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 RPL7P11-201ENST00000437586 658 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC002504.1-201ENST00000438281 691 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 MGAT2P1-201ENST00000449718 797 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 GAPDHP17-201ENST00000449858 1001 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 VN1R38P-201ENST00000450265 887 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 MTCO3P20-201ENST00000454926 688 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 Y_RNA.632-201ENST00000459189 102 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 RN7SKP31-201ENST00000516354 278 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 OR6M2P-201ENST00000529831 871 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms