Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC126323.6-202ENST00000568092 3511 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 VDAC1P9-201ENST00000412766 841 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC012519.1-201ENST00000424588 610 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 EIF2S2P4-201ENST00000461070 984 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 RPS20P4-201ENST00000461659 355 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 RPS27AP17-201ENST00000463344 455 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 HMGN1P15-201ENST00000513870 295 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC011458.1-201ENST00000604034 617 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC008966.2-201ENST00000606157 453 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC012557.1-201ENST00000607115 611 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC234782.5-201ENST00000617723 324 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC074276.2-201ENST00000619891 348 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AC091905.2-201ENST00000623143 306 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 CDY11P-201ENST00000447168 1651 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
PDS5AQ29RF7 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.32□□□□□ -1.56
PDS5AQ29RF7 AL136520.1-201ENST00000600311 1322 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC021242.1-201ENST00000507315 2035 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 CDY14P-201ENST00000431260 1014 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 CDY12P-201ENST00000440679 1015 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 CDY13P-201ENST00000445813 1015 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 CDY23P-201ENST00000451661 1014 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 DDX39BP2-208ENST00000453923 258 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AL672167.3-201ENST00000465951 960 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AL592156.1-201ENST00000508758 304 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 SEC11B-201ENST00000518383 499 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 MTND5P21-201ENST00000531961 522 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC025175.1-201ENST00000606482 759 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC092653.1-201ENST00000608509 531 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 AC110792.4-201ENST00000609843 298 ntBASIC5.31□□□□□ -1.56
PDS5AQ29RF7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDS5AQ29RF7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 DDX6P1-205ENST00000441966 1436 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 RNU6-697P-201ENST00000363348 107 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 SNORA70C-201ENST00000384538 135 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 SNRPFP1-201ENST00000414761 252 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 GTF2IP2-201ENST00000424290 697 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 BTF3P10-201ENST00000433415 495 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AL132765.1-201ENST00000434165 553 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 RPL23AP37-201ENST00000479658 549 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 OR11I1P-201ENST00000486033 954 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC108157.1-201ENST00000510511 539 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 AC008958.1-201ENST00000511047 682 ntBASIC5.3□□□□□ -1.56
PDS5AQ29RF7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.3□□□□□ -1.56
PDS5AQ29RF7 MRPL49P2-201ENST00000521066 465 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms