Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 AC083923.1-201ENST00000523708 376 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN20P56880 OR8I1P-201ENST00000529291 931 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 EIF4A2P5-201ENST00000529914 499 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AP002812.4-201ENST00000532139 286 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 OR7E128P-201ENST00000532736 1024 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 OR8K4P-201ENST00000534608 872 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC087897.1-201ENST00000550134 156 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 AC027455.1-201ENST00000574104 594 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 RN7SL52P-201ENST00000584271 284 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC018695.5-201ENST00000605872 315 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AC133644.2-201ENST00000608142 540 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 EIF3FP1-201ENST00000613970 806 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AL122125.1-201ENST00000616999 600 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.57□□□□□ -1.68
CLDN20P56880 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN20P56880 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 AC073055.1-201ENST00000456901 1621 ntBASIC4.57□□□□□ -1.68
CLDN20P56880 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN20P56880 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN20P56880 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN20P56880 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 AL022322.2-201ENST00000624072 20397 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN20P56880 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 RNA5SP123-201ENST00000363244 119 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN20P56880 RNU6-98P-201ENST00000384173 107 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN20P56880 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 AL035079.1-201ENST00000405210 287 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC246680.2-201ENST00000422106 389 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 NANOGP5-201ENST00000424456 877 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN20P56880 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN20P56880 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 RPL7P32-201ENST00000457119 744 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC091180.1-201ENST00000462104 372 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC090686.1-201ENST00000481577 749 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
CLDN20P56880 RN7SL97P-201ENST00000486780 299 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 RN7SL244P-201ENST00000493405 297 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN20P56880 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN20P56880 COX6B1P5-201ENST00000509843 249 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC108471.1-201ENST00000513977 287 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN20P56880 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC104417.1-201ENST00000523974 751 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 OR10V3P-201ENST00000525712 725 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 NDUFS5P6-201ENST00000529136 295 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 LRRC6P1-201ENST00000532188 885 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC006518.2-201ENST00000542513 940 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN20P56880 POLR2KP1-201ENST00000553226 168 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN20P56880 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 ZNF92P3-201ENST00000596594 954 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 AL445435.1-201ENST00000604232 665 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC005377.1-201ENST00000605126 456 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 RNU4-5P-201ENST00000607255 135 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AC108359.1-201ENST00000616451 1211 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AL035461.2-201ENST00000619201 524 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 AL109659.3-201ENST00000624985 950 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 U6.107-201ENST00000637108 79 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 AL137100.1-201ENST00000556703 1620 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLDN20P56880 DDX18P4-201ENST00000511690 1966 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 SOCS5P3-201ENST00000425115 1576 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN20P56880 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN20P56880 SAMMSON-213ENST00000641336 1521 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms