Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CR1P49238 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CR1P49238 RPL7P61-201ENST00000451721 751 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 RPS3AP53-201ENST00000454716 778 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 RN7SL329P-201ENST00000467740 299 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CR1P49238 RPS27AP16-201ENST00000492222 470 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 MTND4LP2-201ENST00000502312 285 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 PPBPP1-201ENST00000510807 373 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CR1P49238 RNU6-491P-201ENST00000516099 110 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 RNA5SP154-201ENST00000516193 111 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 VTA1P2-201ENST00000520205 911 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 AC090151.1-201ENST00000520784 730 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CR1P49238 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CX3CR1P49238 AP001922.4-201ENST00000526967 290 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CR1P49238 UBE2FP2-201ENST00000566646 462 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 OR1F2P-201ENST00000570470 933 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 MIR4737-201ENST00000583979 81 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
CX3CR1P49238 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CR1P49238 AC139769.3-201ENST00000618383 175 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 AP006248.2-201ENST00000623309 592 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CR1P49238 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CR1P49238 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CR1P49238 AC139769.1-204ENST00000472297 1931 ntBASIC3.97□□□□□ -1.77
CX3CR1P49238 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CX3CR1P49238 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CR1P49238 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CX3CR1P49238 NXPH1-205ENST00000602349 1953 ntBASIC3.96□□□□□ -1.77
CX3CR1P49238 VN2R3P-201ENST00000422626 1412 ntBASIC3.96□□□□□ -1.77
CX3CR1P49238 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.96□□□□□ -1.77
CX3CR1P49238 AC010928.1-201ENST00000592477 1447 ntBASIC3.96□□□□□ -1.77
CX3CR1P49238 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CR1P49238 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 RNA5SP151-201ENST00000365632 117 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CR1P49238 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 RN7SKP278-201ENST00000410504 342 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC009965.2-201ENST00000425328 970 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AL138785.1-201ENST00000425821 331 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC073069.1-201ENST00000428657 441 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AL606490.8-201ENST00000441624 319 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC073648.4-201ENST00000442655 781 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.96□□□□□ -1.78
CX3CR1P49238 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC008638.1-201ENST00000506035 866 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC008694.2-201ENST00000517591 306 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC090819.1-201ENST00000523800 1111 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 BRD9P1-201ENST00000529855 560 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC084757.1-201ENST00000559987 490 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CR1P49238 MIR4716-201ENST00000579628 84 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC073091.2-201ENST00000603205 907 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC022387.2-201ENST00000604050 448 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AL133338.2-201ENST00000604292 736 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AP004372.1-201ENST00000604842 844 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC023509.5-201ENST00000617434 807 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CX3CR1P49238 AC000123.2-201ENST00000623124 461 ntBASIC3.96□□□□□ -1.78
CX3CR1P49238 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.96□□□□□ -1.78
CX3CR1P49238 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CX3CR1P49238 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CX3CR1P49238 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CX3CR1P49238 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CR1P49238 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CR1P49238 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.95□□□□□ -1.78
CX3CR1P49238 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CR1P49238 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CX3CR1P49238 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CX3CR1P49238 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CR1P49238 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CR1P49238 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.95□□□□□ -1.78
CX3CR1P49238 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.95□□□□□ -1.78
CX3CR1P49238 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CR1P49238 RNU1-44P-201ENST00000384453 163 ntBASIC3.95□□□□□ -1.78
CX3CR1P49238 MIR7-1-201ENST00000384871 110 ntBASIC3.95□□□□□ -1.78
CX3CR1P49238 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CX3CR1P49238 OR1F12-201ENST00000402365 945 ntBASIC3.95□□□□□ -1.78
CX3CR1P49238 RNA5SP498-201ENST00000411342 120 ntBASIC3.95□□□□□ -1.78
CX3CR1P49238 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.95□□□□□ -1.78
CX3CR1P49238 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms