Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 RPL23AP83-201ENST00000434984 473 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 NMNAT1P2-201ENST00000435192 860 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AL356276.2-201ENST00000435919 558 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 RPL23AP81-201ENST00000455252 467 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL12P48061 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL12P48061 RNU6-513P-201ENST00000516104 104 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 HSPE1P5-201ENST00000561489 272 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 AC005520.3-201ENST00000602874 370 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AC112230.1-201ENST00000604342 547 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AL161912.3-201ENST00000605404 628 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 RNU6-84P-201ENST00000607737 102 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AL451049.1-201ENST00000608672 497 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL12P48061 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.31□□□□□ -1.72
CXCL12P48061 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CXCL12P48061 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
CXCL12P48061 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL12P48061 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
CXCL12P48061 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL12P48061 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CXCL12P48061 RNU4-44P-201ENST00000363050 141 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AC097374.1-203ENST00000400783 485 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AL590704.1-201ENST00000402856 794 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.3□□□□□ -1.72
CXCL12P48061 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL12P48061 AL035246.1-201ENST00000433554 1255 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 CEACAMP1-201ENST00000434624 1035 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL12P48061 AL591623.2-201ENST00000449978 222 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL12P48061 AP000859.1-201ENST00000525536 307 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 OR7E10P-201ENST00000526420 991 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 SETP1-201ENST00000556014 845 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.3□□□□□ -1.72
CXCL12P48061 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL12P48061 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL12P48061 AC027216.1-201ENST00000577726 685 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AC107982.3-201ENST00000584957 985 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AC107993.1-201ENST00000591343 684 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 AP003072.5-201ENST00000623872 773 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 FP325313.1-201ENST00000638228 703 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 DDX18P6-201ENST00000450119 1997 ntBASIC4.3□□□□□ -1.72
CXCL12P48061 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL12P48061 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CXCL12P48061 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL12P48061 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL12P48061 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL12P48061 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 RN7SKP74-201ENST00000362849 309 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 RNU6-525P-201ENST00000363685 104 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 RNU11-4P-201ENST00000391149 133 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 RNU2-22P-201ENST00000411266 212 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC062016.2-201ENST00000420950 676 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 YME1L1P1-201ENST00000429435 297 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AL445584.1-201ENST00000431451 330 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL12P48061 BTF3P6-201ENST00000448054 499 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL12P48061 AC007688.1-201ENST00000475592 759 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 GAPDHP36-201ENST00000480688 918 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC138409.2-202ENST00000507274 458 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 RFPL4AP5-201ENST00000514977 504 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL12P48061 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 ADAM3B-201ENST00000569937 840 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL12P48061 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC090181.2-201ENST00000602975 672 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL12P48061 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 AC091905.2-201ENST00000623143 306 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL12P48061 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms