Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.04□□□□□ -1.28
VARSP26640 RN7SL688P-201ENST00000471754 275 ntBASIC7.04□□□□□ -1.28
VARSP26640 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.04□□□□□ -1.28
VARSP26640 OR4D12P-201ENST00000509361 911 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.04□□□□□ -1.28
VARSP26640 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.04□□□□□ -1.28
VARSP26640 RNA5SP116-201ENST00000516132 98 ntBASIC7.04□□□□□ -1.28
VARSP26640 HIGD1AP6-201ENST00000521833 279 ntBASIC7.04□□□□□ -1.28
VARSP26640 MRPS16P1-201ENST00000523462 412 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC022616.3-201ENST00000523940 148 ntBASIC7.04□□□□□ -1.28
VARSP26640 AP000676.2-201ENST00000529711 301 ntBASIC7.04□□□□□ -1.28
VARSP26640 PHBP2-201ENST00000532859 806 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.04□□□□□ -1.28
VARSP26640 AC087257.2-201ENST00000538759 928 ntBASIC7.04□□□□□ -1.28
VARSP26640 ATP5J2P4-201ENST00000538774 267 ntBASIC7.04□□□□□ -1.28
VARSP26640 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.04□□□□□ -1.28
VARSP26640 FRG2IP-201ENST00000563581 781 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.04□□□□□ -1.28
VARSP26640 AP001554.1-201ENST00000604533 376 ntBASIC7.04□□□□□ -1.28
VARSP26640 OR10AB1P-201ENST00000609613 938 ntBASIC7.04□□□□□ -1.28
VARSP26640 MIR6070-201ENST00000613967 103 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC096861.1-201ENST00000616652 240 ntBASIC7.04□□□□□ -1.28
VARSP26640 U1.34-201ENST00000618578 162 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC106782.7-201ENST00000624024 418 ntBASIC7.04□□□□□ -1.28
VARSP26640 AC133555.5-201ENST00000624430 418 ntBASIC7.04□□□□□ -1.28
VARSP26640 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.04□□□□□ -1.28
VARSP26640 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 U2.22-201ENST00000636441 106 ntBASIC7.04□□□□□ -1.28
VARSP26640 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.04□□□□□ -1.28
VARSP26640 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.04□□□□□ -1.28
VARSP26640 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.04□□□□□ -1.28
VARSP26640 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
VARSP26640 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.04□□□□□ -1.28
VARSP26640 CCDC150P1-201ENST00000537123 2215 ntBASIC7.04□□□□□ -1.28
VARSP26640 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VARSP26640 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.04□□□□□ -1.28
VARSP26640 AL359195.2-201ENST00000623657 4412 ntBASIC7.04□□□□□ -1.28
VARSP26640 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 AC130360.2-201ENST00000533477 1556 ntBASIC7.03□□□□□ -1.28
VARSP26640 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 Y_RNA.135-201ENST00000363439 95 ntBASIC7.03□□□□□ -1.28
VARSP26640 RNA5SP396-201ENST00000364834 120 ntBASIC7.03□□□□□ -1.28
VARSP26640 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 ARMCX7P-201ENST00000372828 562 ntBASIC7.03□□□□□ -1.28
VARSP26640 MRPL42P3-201ENST00000401492 326 ntBASIC7.03□□□□□ -1.28
VARSP26640 SUMO2P13-201ENST00000403109 272 ntBASIC7.03□□□□□ -1.28
VARSP26640 MRPL32P1-201ENST00000406301 247 ntBASIC7.03□□□□□ -1.28
VARSP26640 MIR1204-201ENST00000408388 67 ntBASIC7.03□□□□□ -1.28
VARSP26640 MIR548F5-201ENST00000408421 86 ntBASIC7.03□□□□□ -1.28
VARSP26640 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VARSP26640 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AC119618.1-201ENST00000434191 222 ntBASIC7.03□□□□□ -1.28
VARSP26640 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.03□□□□□ -1.28
VARSP26640 TXNP1-201ENST00000441872 371 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 H2AFZP6-201ENST00000444403 394 ntBASIC7.03□□□□□ -1.28
VARSP26640 SLAMF6P1-201ENST00000451067 602 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC107399.1-201ENST00000451226 265 ntBASIC7.03□□□□□ -1.28
VARSP26640 RPL29P23-201ENST00000486188 442 ntBASIC7.03□□□□□ -1.28
VARSP26640 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.03□□□□□ -1.28
VARSP26640 FAM206BP-201ENST00000510179 541 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC027801.3-201ENST00000515049 698 ntBASIC7.03□□□□□ -1.28
VARSP26640 Y_RNA.665-201ENST00000516177 98 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC090572.1-201ENST00000519251 160 ntBASIC7.03□□□□□ -1.28
VARSP26640 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.03□□□□□ -1.28
VARSP26640 AP003072.2-201ENST00000527756 676 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC023442.1-201ENST00000531247 422 ntBASIC7.03□□□□□ -1.28
VARSP26640 AC027544.3-201ENST00000535082 757 ntBASIC7.03□□□□□ -1.28
VARSP26640 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.03□□□□□ -1.28
VARSP26640 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms